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scnpilot_p_inoc_scaffold_245_20

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 27049..27693

Top 3 Functional Annotations

Value Algorithm Source
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1522072 species="B similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 201.0
  • Bit_score: 240
  • Evalue 2.90e-60
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030E56B9 similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 201.0
  • Bit_score: 233
  • Evalue 1.50e-58
luxI; N-acyl-L-homoserine lactone synthetase similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 186.0
  • Bit_score: 228
  • Evalue 1.70e-57

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Taxonomy

Sphingobium sp. ba1 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGCACATCATTATCCATTTCTTTCGCCGCCCATCCCCGAAGCAACGATGCGTTCGATGTTCGCCGCGCGCAAAGCGGTGTTTGTCGATCTTCTCAAATGGAACTTGCCCGTGCTCGCCGGGCACTACGAGATCGACCAGTTCGACACGCACCATGCCGACTATATCGTGCTGACAAAATCGGATGGCGAGCATCTGGGATCAGCACGGCTGTTGCCCACGAGCCGCCCGCATATTCTGGGCAGCTTCTATGCCCATCTCTGCGAGGAGATGCCCCCAAACGGCCCCCAAGTCGCGGAAATCACGCGTTTCTGCCTCGACCGGCGGCTGAATGCGACGAAGCGCCGACAGGTGCGCGACAATCTGGTGATGGCGCTTGCCGACCATGCCATCGTCCATGGCATCACCACCTATGTCGCGATCGCGGGGCAAGCCTGGTTTGCCCAGATCGAGCGCTTCGGCTGGCAATGCCGCGCGCTGGGCGCTCCCGGCTTTGCCGAGGGCAGCCCGATCATTGCACTGCGCATCGACATCACGCCTGAGACACCGCAACGGCTCAGGCAAGGTGGCATCGGATCAACACCGGGCATGAATGTTCACCGTACCGCACGGCACCCTTCCAGCCGCCATCGCGCAGCAGCCTGA
PROTEIN sequence
Length: 215
MAHHYPFLSPPIPEATMRSMFAARKAVFVDLLKWNLPVLAGHYEIDQFDTHHADYIVLTKSDGEHLGSARLLPTSRPHILGSFYAHLCEEMPPNGPQVAEITRFCLDRRLNATKRRQVRDNLVMALADHAIVHGITTYVAIAGQAWFAQIERFGWQCRALGAPGFAEGSPIIALRIDITPETPQRLRQGGIGSTPGMNVHRTARHPSSRHRAAA*