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scnpilot_p_inoc_scaffold_472

Search features with annotation key words

Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_472_31
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33006..37283
DNA (4278bp) protein (1426aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RPOC_NOVAD rbh
scnpilot_p_inoc_scaffold_472_32
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37701..39362
DNA (1662bp) protein (554aa)
nadE; NAD synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000313|EMBL:ABD25415.1}; EC=6.3.1.5 {ECO:0000313|EMBL:ABD25415.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
NH(3)-dependent NAD(+) synthetase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9Q8_NOVAD rbh
scnpilot_p_inoc_scaffold_472_33
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39668..40996
DNA (1329bp) protein (443aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=983920 species="Bacteria; Pr
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17 6.1.1.24)
Glutamate--tRNA ligase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z6A2_9SPHN rbh
scnpilot_p_inoc_scaffold_472_34
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41255..44008)
DNA (2754bp) protein (918aa)
protein-PII uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WL27_9SPHN rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
scnpilot_p_inoc_scaffold_472_35
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44171..45127
DNA (957bp) protein (319aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=983920
Prolipoprotein diacylglyceryl transferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z697_9SPHN rbh
prolipoprotein diacylglyceryl transferase
scnpilot_p_inoc_scaffold_472_36
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45120..46172
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK80_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48687.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_472_37
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46320..46970
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WQG6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55904.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_472_38
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47240..47560)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G327_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27746.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_472_39
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47553..50114)
DNA (2562bp) protein (854aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G328_NOVAD rbh
scnpilot_p_inoc_scaffold_472_40
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50231..51682
DNA (1452bp) protein (484aa)
Peptidase M20 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G329_NOVAD rbh
Peptidase M20:Peptidase dimerisation {ECO:0000313|EMBL:GAO54839.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
hypothetical protein
scnpilot_p_inoc_scaffold_472_41
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51811..53991
DNA (2181bp) protein (727aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NG20_9SPHN rbh
Scaffold13, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31211.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
TonB-dependent receptor-like protein
scnpilot_p_inoc_scaffold_472_42
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54456..56015
DNA (1560bp) protein (520aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase (EC:6.3.5.2) rbh
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Sphingomonas sp. LH128 RepID=J8SQI9_9SPHN rbh
scnpilot_p_inoc_scaffold_472_43
unknown

Not on your lists

56023..56163
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_472_44
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56165..56620)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HHJ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK92462.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_472_45
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56701..58128)
DNA (1428bp) protein (476aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5I0_9SPHN rbh
Peptidase U62, modulator of DNA gyrase {ECO:0000313|EMBL:EGD60090.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
peptidase U62, modulator of DNA gyrase
scnpilot_p_inoc_scaffold_472_46
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58193..58396)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6D7D8
Uncharacterized protein {ECO:0000313|EMBL:EQB17474.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_472_47
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58719..59972
DNA (1254bp) protein (418aa)
glycosyl transferase family 1 n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000370ADBC rbh
Glycosyltransferase {ECO:0000313|EMBL:GAO57010.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
glycosyltransferase
scnpilot_p_inoc_scaffold_472_48
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60028..60972
DNA (945bp) protein (315aa)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HWM3_9SPHN rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQB17477.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
multidrug ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_472_49
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61010..61234)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP74621.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_472_50
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61511..63085
DNA (1575bp) protein (525aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CCA91199.1}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CCA91199.1};; TaxID=702113 species="Bacteria; Proteobacte
L-aspartate oxidase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGD3_9SPHN
scnpilot_p_inoc_scaffold_472_51
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63721..64926
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZBR8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD58006.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_472_52
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65009..65656
DNA (648bp) protein (216aa)
ParA-like protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCS8_9SPHN
ParA-like protein {ECO:0000313|EMBL:EGD57612.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium ni
ParA-like protein
scnpilot_p_inoc_scaffold_472_53
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65661..65951
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBR6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD58008.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_472_54
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65996..67066)
DNA (1071bp) protein (357aa)
Monooxygenase, putative n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMH4_9SPHN
Monooxygenase, putative {ECO:0000313|EMBL:CCW16792.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
flavin-containing monooxygenase
scnpilot_p_inoc_scaffold_472_55
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67067..67303)
DNA (237bp) protein (79aa)
Redox-active disulfide protein 2 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMU3_9SPHN
thiol-disulfide isomerase and thioredoxins Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
thiol-disulfide isomerase and thioredoxins
scnpilot_p_inoc_scaffold_472_56
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67315..68370)
DNA (1056bp) protein (352aa)
Transporter n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJ50_9SPHN rbh
permease; K07089 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
permease
scnpilot_p_inoc_scaffold_472_57
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68372..68680)
DNA (309bp) protein (103aa)
Arsenical resistance operon repressor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHU9_9SPHN
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_472_58
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68828..69190
DNA (363bp) protein (121aa)
Putative transcriptional regulator, ArsR n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJB5_9SPHN
Putative transcriptional regulator, ArsR {ECO:0000313|EMBL:BAF03427.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_472_59
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69187..69693
DNA (507bp) protein (169aa)
ArsR family transcriptional regulator n=2 Tax=Sphingobium RepID=T0I0K8_9SPHN
ArsR family transcriptional regulator Tax=GWF1_Sphingomonadales_63_6_curated
protein-tyrosine phosphatase
scnpilot_p_inoc_scaffold_472_60
unknown

Not on your lists

69794..70147
DNA (354bp) protein (118aa)

This feature has no annotations

Displaying items 31-60 of 65 in total

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