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scnpilot_p_inoc_scaffold_472

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_472_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
DNA helicase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FBAB0E
DNA helicase {ECO:0000313|EMBL:AHE51699.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenen
DNA helicase
scnpilot_p_inoc_scaffold_472_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259..624)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB91_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEZ12872.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
scnpilot_p_inoc_scaffold_472_3
unknown

Not on your lists

comp(617..799)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_472_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(803..979)
DNA (177bp) protein (59aa)
DNA binding domain, excisionase family {ECO:0000313|EMBL:KEZ12869.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
scnpilot_p_inoc_scaffold_472_5
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1074..2153)
DNA (1080bp) protein (360aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
scnpilot_p_inoc_scaffold_472_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2924..4660)
DNA (1737bp) protein (579aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC27317.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_p_inoc_scaffold_472_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4742..6043)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000372AF0D rbh
Integrase {ECO:0000313|EMBL:GAO54222.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.
transposase
scnpilot_p_inoc_scaffold_472_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6225..6983)
DNA (759bp) protein (253aa)
S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B63328
SAM-dependent methyltransferase yafE {ECO:0000313|EMBL:GAO55195.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
type 11 methyltransferase
scnpilot_p_inoc_scaffold_472_9
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7063..7833
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HTU9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB19771.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_472_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7818..8570)
DNA (753bp) protein (251aa)
Inositol monophosphatase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFB7_NOVAD rbh
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:ABP64628.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_472_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8570..8821)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G384_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO56666.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_472_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8867..10819)
DNA (1953bp) protein (651aa)
Adenylylsulfate kinase {ECO:0000313|EMBL:ABD27688.1}; EC=2.7.1.25 {ECO:0000313|EMBL:ABD27688.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (EC:2.7.1.25 2.7.7.4)
adenylylsulfate kinase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4B8B7 rbh
scnpilot_p_inoc_scaffold_472_13
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10819..11739)
DNA (921bp) protein (307aa)
sulfate adenylyltransferase (EC:2.7.7.4) rbh
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064, ECO:0000313|EMBL:CCA93648.1}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064, ECO:0000313|EMBL:CCA93648.1};; ATP-sulfurylase small
Sulfate adenylyltransferase subunit 2 n=2 Tax=Novosphingobium RepID=F6IFZ0_9SPHN rbh
scnpilot_p_inoc_scaffold_472_14
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11880..13142)
DNA (1263bp) protein (421aa)
Alpha-ketoglutarate permease KgtP n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GNA4_CUPNN
kgtP; alpha-ketoglutarate permease KgtP
Alpha-ketoglutarate permease KgtP {ECO:0000313|EMBL:AEI79078.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavi
scnpilot_p_inoc_scaffold_472_15
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13139..14296)
DNA (1158bp) protein (386aa)
hippurate hydrolase (EC:3.5.1.32)
Hippurate hydrolase {ECO:0000313|EMBL:CCA90354.1}; EC=3.5.1.32 {ECO:0000313|EMBL:CCA90354.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Hippurate hydrolase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDH9_9SPHN
scnpilot_p_inoc_scaffold_472_16
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14379..14792)
DNA (414bp) protein (138aa)
Globin n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZB73_9SPHN
Globin {ECO:0000313|EMBL:EGD58060.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifige
globin
scnpilot_p_inoc_scaffold_472_17
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14777..15226)
DNA (450bp) protein (150aa)
thioredoxin n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3789C
Thioredoxin {ECO:0000313|EMBL:EGD58061.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogen
thioredoxin
scnpilot_p_inoc_scaffold_472_18
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15288..16853)
DNA (1566bp) protein (522aa)
Aldehyde dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8D1_9SPHN rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EGD59094.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
aldH; nADP-dependent fatty aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_472_19
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17003..18283)
DNA (1281bp) protein (427aa)
UPI0003D61FE6 related cluster n=1 Tax=unknown RepID=UPI0003D61FE6 rbh
Sugar phosphate permease {ECO:0000313|EMBL:KEZ20892.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
major facilitator transporter
scnpilot_p_inoc_scaffold_472_20
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18443..19309)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCD5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57783.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
surface antigen
scnpilot_p_inoc_scaffold_472_21
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19510..19815
DNA (306bp) protein (102aa)
PhnA protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7A3_NOVAD
PhnA protein
PhnA protein {ECO:0000313|EMBL:ABD26270.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromati
scnpilot_p_inoc_scaffold_472_22
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19822..20763
DNA (942bp) protein (314aa)
Phosphofructokinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2U5_9SPHN rbh
1-phosphofructokinase
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
scnpilot_p_inoc_scaffold_472_23
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20763..21188
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WEK7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAQ27939.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
scnpilot_p_inoc_scaffold_472_24
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21568..21858
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7A4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS48340.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_p_inoc_scaffold_472_25
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22139..22549)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488FA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI98912.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
scnpilot_p_inoc_scaffold_472_26
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22931..24793)
DNA (1863bp) protein (621aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
phosphomethylpyrimidine synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7AA00 rbh
thiamine biosynthesis protein ThiC
scnpilot_p_inoc_scaffold_472_27
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24811..25212)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKH9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65042.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_p_inoc_scaffold_472_28
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25529..26767
DNA (1239bp) protein (413aa)
Lycopene beta cyclase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQI3_9SPHN rbh
Lycopene beta cyclase {ECO:0000313|EMBL:EJU12855.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
lycopene cyclase
scnpilot_p_inoc_scaffold_472_29
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26764..28245
DNA (1482bp) protein (494aa)
Phytoene desaturase (Lycopene-forming) {ECO:0000313|EMBL:AKH44039.1}; EC=1.3.99.31 {ECO:0000313|EMBL:AKH44039.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
phytoene dehydrogenase (EC:1.14.99.-)
Phytoene dehydrogenase n=2 Tax=Novosphingobium RepID=F6IJD3_9SPHN
scnpilot_p_inoc_scaffold_472_30
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28784..32935
DNA (4152bp) protein (1384aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RPOB_NOVAD rbh
Displaying items 1-30 of 65 in total

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