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scnpilot_p_inoc_scaffold_472_30

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 28784..32935

Top 3 Functional Annotations

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Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 999.99
  • Bit_score: 2503
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 999.99
  • Bit_score: 2503
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RPOB_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 999.99
  • Bit_score: 2503
  • Evalue 0.0
  • rbh

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4152
ATGGCAACCCAGCCCATCTCCCGCGCTTCGGCCAAGCGCCGGATCCGCAAGATCTTCGGTGATATTCACGAAGTGACGCAGATGCCGAACCTGATCCAGGTTCAGCGCGAATCCTATGAGCAGTTCCTGCGCTCGAACCCCGCTGTGGGTTACGTCTCGGGTCTGGAAAAGACGCTGCGTTCGGTGTTCCCGATCCGCGACTTTGCCGGGACCAGCGAGCTGGACTTTGTGCATTACGAATTGGAAGAGCCCAAGTACGACATCACCGAATGTCGTCAGCGCGGGATCACCTATGCCGCTCCGATGAAGGTCACGCTGCGCCTGATCGTGTTTGAAGTCGACGCCGAGACCGAGACCCGGTCGGTGCTCGATATCAAGGAGCAGGACGTGTACATGGGTGACATGCCGCTCATGACCGAGAACGGCACCTTCGTCATCAACGGCACCGAGCGCGTGATCGTGTCGCAGATGCACCGTTCGCCGGGCGTTCTGTTCGACCATGACCGCGGCAAGACGCATTCCTCGGGCAAGTTCCTGTTCGCCGCCCGCGTGATCCCGTATCGCGGTTCGTGGCTGGACTTTGAATTTGACGCCAAGGACATCGTCAACGTCCGTATCGACCGCAAGCGCAAGCTGCCCGTCACGGCGCTGCTGCATGCGCTGGGTTTGAACGACGAAGAGATCCTGCACTACTTCTATCAGACGATCGTCTGGAACCGCGCGAGCGGCGGCTGGAAGATCCCCTATGTTGCCGAAGCATGGCGCGGCGCCAAGCCCGCTTTCGACATCGTCGATGCGGCCAGCGGCGAAGTGGTCTTTGCAGCGGGCACCAAGATCAGCCCGCGTGCTGCCAACAAGGCGGAAAAGGACGGCCTCAAGGATCTGCTGATCCCGACCGAGGAAATCTTTGGCCGTTACAGCGCCAATGACGTCATCAACGAATCGACCGGCCGCATCTATATCGAGGCCGGCGAAGAGGTGACGGCGGAAAATCTGGCCGCGCTCGACGCTGCCGGGATTGACGCTTTCGAACTGCTCGACATCGACCATGTTTCGACCGGTCCGTGGATCCGCAACACGCTCAAGGCTGACAAGGCTGAAGACCGCGATCACGCTCTGGCCGATATCTATCGCGTGATGCGCCCCGGCGAACCGCCGACGCGCGAAACCGCCGAAGCGCTGTTTGCCGGCCTGTTCTTTGACGCTGACCGCTATGACCTCTCGGCCGTGGGCCGCGTCAAGCTGAACATGCGTCTTGGCCTGGAATGCGACGACACGATCACCACGCTGCGCACCGACGACATCATGGCCGTCGTCAAGGAGCTGGTGAACCTGAAGGACGGCAAGGGCGAAGTCGATGACATCGACAACCTCGGCAACCGCCGCGTCCGTTCGGTGGGCGAGCTGCTGGAAAACCAGTATCGCGTCGGCCTGCTGCGCATGGAGCGCGCCGTCAAGGAGCGCATGAGCTCGGTTGACGTCTCGACCGTGATGCCCAACGACCTCATCAACGCCAAGCCCGCCGTGGCCGCGGTGCGTGAGTTCTTCGGCTCCTCGCAGCTCTCGCAGTTCATGGACCAGACCAACCCGCTCTCGGAAGTGACGCACAAGCGCCGCGTTTCGGCGCTCGGGCCGGGCGGTCTGACGCGTGAGCGCGCGGGCTTTGAAGTCCGCGACGTTCACCCGACCCACTATGGCCGTATCTGCCCGATTGAAACGCCGGAAGGCCCGAACATCGGTCTGATCAACTCGCTCTCGACCTTTGCGCGCGTCAACAAGTACGGTTTCATCGAAACCCCGTACCGCAAGGTGATCGACGGCAAGGTGACCAAGGACGTGGTCTACCTCTCGGCGATGGAAGAGCAGAAGCACACGGTGGCGCAGGCTTCGGCCGAAACCAACGCGGATGGCTCTTTCGTCGAAGAACTGGTTTCGGCCCGTCAGAACGGCGAATTCGTGATGGCGCCGCGCGAAACGATCACGCTGATGGACGTTTCGCCCAAGCAGCTCGTTTCGGTCGCCGCCTCGCTCATTCCCTTCCTGGAAAATGACGACGCCAACCGCGCGCTCATGGGTTCGAACATGCAGCGTCAGGCTGTGCCGCTGGTGAAGGCCGATGCGCCTTTCGTCGGCACGGGCATGGAAGAAACGGTTGCCCGTGACTCGGGCGCCGCGATCGCCGCCTCGCGCGCCGGTATCGTCGATCAGGTGGATGCCACCCGTATCGTGATCCGCGTGTCGGGTGATATCGAGCCGGGCAAGTCGGGCGTGGACATCTACACGCTGCAGAAGTTCGAGCGTTCGAACCAGTCGACCTGCATCAACCAGCGTCCGCTGGTGAAGGTGGGCGACAGCGTCGAAAAGGGCGATATCATTGCCGACGGTCCCTCGACCGAGCTGGGCGAGCTGGCGCTGGGCCGCAACGTGCTGGTCGCGTTCATGCCCTGGAATGGCTACAATTACGAAGACTCCATCCTGATCAGCGAACGCATCGTGAAGGAAGACGTCTTTACCTCGATCCACATCGAGGAATTTGAAGTCATGGCCCGCGACACCAAGCTTGGGCCTGAAGACATCACCCGCGACATCCCGAATGTGGGCGAGGAATCGCTGCGCAATCTCGACGAAGCGGGCATCGTCTATATCGGCGCCGAGGTACACCCCGGTGACATCCTGGTCGGCAAGATCACGCCCAAGGGCGAATCGCCGATGACGCCGGAAGAAAAGCTGCTGCGCGCGATCTTCGGTGAAAAGGCCAGCGACGTGCGTGACACCTCGCTGCGTCTGCCGCCGGGCGTTGCCGGTACGATTGTCGACGTGCGCGTCTTCAACCGTCACGGTATCGAAATCGACGACCGTACCCGCGCGATCCAGAACGAGGAAATCGAACGCCTCGCCAAGGACCGTGAGGACGAGCGCGCGATTCTGAACCGCGCCACCTTCAACCGTCTCAAGGACATGCTGCTCGGCCAAGTGGCCGCGGCCGCGCCCAAGGGGCTGAAGAAGGGCATCGAGATCACCGAGGAAGTGCTGGCCGAGGTCGAGCGCTACGAATGGTGGAAGTTCGCCGTGGCCGACGATGCGCGCCAGCAGCAGCTGGAAGCGACCAAGGCGCAGTATGACACGGCCATCAAGGCGATCGTCGAGAAGTTCGAAGATCGTAAGGAAAAGCTGGAACGCGGCGACGAGCTGGCCCCGGGCGTCCTCAAGATGGTCAAGGTGTTCGTGGCGGTGAAGCGCAAGCTGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGTATCATCAGCCGCATCCTGCCGCAGGAAGACATGCCCTTCCTGGAAGATGGTACGCCGGTGGACTTCGTGCTGAACCCGCTGGGTGTGCCTTCGCGCATGAACGTGGGTCAGATCTTCGAAACCCATCTGGGCTGGGCCGCGCGCGGTCTGGGTCGCAAGATCGGTGCTGCTCTGGACGCATGGCGCGAGGCCAATCCGAACCCGCAGGCGGGCGAAGCCCCCGAAGCGGTGCGCGAATTGCTCAAGGACATCTATGGCGACAACTACACCGCCGAGCTGGAGGAGCGCAGCGATCAGGAAATCGTCGAGCTGGCCCAAAGCGTGCGCAACGGCGTGCCGATGGGTTCGCCGGTGTTCGACGGCGCGGTGGAAGCCGATGTGACCGCGATGCTGCGCAAGGCCGGGCTGGATGAATCGGGTCAGGTGACCCTGTTCGACGGCCGCACGGGTGAGGCGTTCGACCGCAAGGTGACCGTGGGCATGAAGTATGTCCTCAAGCTGCACCACCTTGTTGACGACAAGATCCATGCGCGTTCGATCGGGCCCTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGTAAGGCGCAGTTCGGTGGTCAGCGCTTTGGTGAAATGGAAGTGTGGGCGCTGCAGGCTTACGGCGCGGCTTACACGCTTCAGGAAATGCTCACCGTCAAGTCGGACGACGTGGTGGGCCGCACCAAGGTGTATGAAGCCATCGTCAAGGGCGACGACACGTTCGAGGCCGGTATCCCCGAAAGCTTCAACGTGCTCGTCAAGGAAATGCGCTCGCTGGGCCTGAATGTCGAACTGTCTTCGTTGACCGACGAGGATGGCGACGATCTGGCCGACGCGGCGGAGTGA
PROTEIN sequence
Length: 1384
MATQPISRASAKRRIRKIFGDIHEVTQMPNLIQVQRESYEQFLRSNPAVGYVSGLEKTLRSVFPIRDFAGTSELDFVHYELEEPKYDITECRQRGITYAAPMKVTLRLIVFEVDAETETRSVLDIKEQDVYMGDMPLMTENGTFVINGTERVIVSQMHRSPGVLFDHDRGKTHSSGKFLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLHALGLNDEEILHYFYQTIVWNRASGGWKIPYVAEAWRGAKPAFDIVDAASGEVVFAAGTKISPRAANKAEKDGLKDLLIPTEEIFGRYSANDVINESTGRIYIEAGEEVTAENLAALDAAGIDAFELLDIDHVSTGPWIRNTLKADKAEDRDHALADIYRVMRPGEPPTRETAEALFAGLFFDADRYDLSAVGRVKLNMRLGLECDDTITTLRTDDIMAVVKELVNLKDGKGEVDDIDNLGNRRVRSVGELLENQYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSTFARVNKYGFIETPYRKVIDGKVTKDVVYLSAMEEQKHTVAQASAETNADGSFVEELVSARQNGEFVMAPRETITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKADAPFVGTGMEETVARDSGAAIAASRAGIVDQVDATRIVIRVSGDIEPGKSGVDIYTLQKFERSNQSTCINQRPLVKVGDSVEKGDIIADGPSTELGELALGRNVLVAFMPWNGYNYEDSILISERIVKEDVFTSIHIEEFEVMARDTKLGPEDITRDIPNVGEESLRNLDEAGIVYIGAEVHPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGIEIDDRTRAIQNEEIERLAKDREDERAILNRATFNRLKDMLLGQVAAAAPKGLKKGIEITEEVLAEVERYEWWKFAVADDARQQQLEATKAQYDTAIKAIVEKFEDRKEKLERGDELAPGVLKMVKVFVAVKRKLQPGDKMAGRHGNKGIISRILPQEDMPFLEDGTPVDFVLNPLGVPSRMNVGQIFETHLGWAARGLGRKIGAALDAWREANPNPQAGEAPEAVRELLKDIYGDNYTAELEERSDQEIVELAQSVRNGVPMGSPVFDGAVEADVTAMLRKAGLDESGQVTLFDGRTGEAFDRKVTVGMKYVLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELSSLTDEDGDDLADAAE*