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scnpilot_p_inoc_scaffold_4_4

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 4081..4776

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 223.0
  • Bit_score: 369
  • Evalue 4.40e-99
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5L5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 223.0
  • Bit_score: 369
  • Evalue 3.20e-99
ribosomal RNA methyltransferase RrmJ/FtsJ similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 219.0
  • Bit_score: 358
  • Evalue 1.60e-96

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAGCCGTTCCGGCCGCGATCCCGGCACCAGATTGAAGAACACCAAGGGCCGCACCGCCTCGCAGGCCCGCTGGCTGCAACGGCAGTTGAACGACCCCTATGTCAAGAAAGCCAAGGCGGACGGCTATCGCAGCCGCGCGGCCTATAAGCTGATCGAACTGGACGATAAATTCGGTCTGGTGAAAGGCTCGCGGCGGGTGGTCGATCTTGGCGTGGCGCCGGGCGGGTGGACGCAGGTGGTGCGCCAGCGCGCGCCGCAAGCGGGCGTGGTCGGCATCGACCTGCTGCCCACCGCCCCGATCGAGGGCGCGATCCTGTTCGAAATGGACTTCATGGCCGACGAGGCCCCCGACGCGCTGATGGAGGCGCTGGGCGGGCGGCCCGATTTGGTGATCTCGGACATGGCCGCCAATACCGTGGGCCACAAACAGACCGACCACCTGCGCACGATGGGCCTTGTGGAAACGGCTGTGGATTTCGCTGTGCACAACCTGTCCAAAGGCGGTGCATTCGTGGCGAAAGTCTTTGCGGGCGGGACCGATCCGGGGCTGCTGAACATCCTCAAGCGGCACTTCACCACCGTAAAGCACGCAAAGCCGCCTGCGAGCCGGAAGGATTCGTCGGAGTGGTATGTGATTGCTCAAGGGTTCAAGGGGACTGTGGCGGAATTGGAGGCCGGTAAGGAAGAAGGGTGA
PROTEIN sequence
Length: 232
MSRSGRDPGTRLKNTKGRTASQARWLQRQLNDPYVKKAKADGYRSRAAYKLIELDDKFGLVKGSRRVVDLGVAPGGWTQVVRQRAPQAGVVGIDLLPTAPIEGAILFEMDFMADEAPDALMEALGGRPDLVISDMAANTVGHKQTDHLRTMGLVETAVDFAVHNLSKGGAFVAKVFAGGTDPGLLNILKRHFTTVKHAKPPASRKDSSEWYVIAQGFKGTVAELEAGKEEG*