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scnpilot_p_inoc_scaffold_4_22

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(28471..28749)

Top 3 Functional Annotations

Value Algorithm Source
Histone-like DNA-binding protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5H3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 92.0
  • Bit_score: 161
  • Evalue 5.20e-37
Histone-like DNA-binding protein {ECO:0000313|EMBL:EGD60352.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 92.0
  • Bit_score: 161
  • Evalue 7.30e-37
integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 92.0
  • Bit_score: 160
  • Evalue 1.90e-37

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGATCAGATCTGAATTGTTGCAGGCACTGGCCAAGGCTAACCCCGAATTGCGCACCGACGATGTGGAAAAGATCGTCGATGTGTTTTTCGATGAAATCGCCCAGCGTCTGGCCGAAGGCGGCCGGGTGGAACTGCGCGGGTTTGGCGCCTTTTCGACGCGCGAACGCGATCCGCGAAAGGGGCGCAATCCGCGCACCGGCGAAGCGGTGGACGTGCCGGGCAAGAAAGTGCCCTTCTTCAAGCCGGGCAAGGAAATGCGCGCCCGGCTCAATGTCTGA
PROTEIN sequence
Length: 93
MIRSELLQALAKANPELRTDDVEKIVDVFFDEIAQRLAEGGRVELRGFGAFSTRERDPRKGRNPRTGEAVDVPGKKVPFFKPGKEMRARLNV*