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scnpilot_p_inoc_scaffold_4_26

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(32144..32650)

Top 3 Functional Annotations

Value Algorithm Source
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3AD04_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 150.0
  • Bit_score: 242
  • Evalue 2.50e-61
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJL30056.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 150.0
  • Bit_score: 242
  • Evalue 3.50e-61
Fur family transcriptional regulator, zinc uptake regulator similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 147.0
  • Bit_score: 241
  • Evalue 2.00e-61

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAGCGCTACGCATGATCACGTCCAAGAACACGCCCACGAGCATCCCCGCCACCGCGAATACAGCGGAGAGGGCCTTGTCATCGCCGCCCGCAACGCGCTGGAAACCGCCGGCGAGCAATGGACCGAAATGCGCGGCGATGTGTTCGACGCCCTTGCCGGACACGCCAAGCCCGCCAGCGCCTATGACATTGCCGAGGCCGTTTCCAAGGCCCGCGACAAGCGTGTGGCAGCCAACAGCGTCTATCGCATCCTCGACCTCTTTGTGCGGACGAATCTGGCCCGGCGAGTCGAAAGCGCCAACGCCTATATCGCCAACCCCCACCCCGGTTGCCGCCACGACTGCATCTTCCTCATCTGCGATGGATGCGGAAAGGCGGTGCATATCGACGATGACCGCCTGACCGGGGCGCTGATTCAGGCTGCGCGTGAGGCCGGGTTTGCCGATGTGCGGCCGGTGGTGGAATTGCGCGGGATGTGTGGGGAGTGTTCTTCGGGCGCGGAGTGA
PROTEIN sequence
Length: 169
MSATHDHVQEHAHEHPRHREYSGEGLVIAARNALETAGEQWTEMRGDVFDALAGHAKPASAYDIAEAVSKARDKRVAANSVYRILDLFVRTNLARRVESANAYIANPHPGCRHDCIFLICDGCGKAVHIDDDRLTGALIQAAREAGFADVRPVVELRGMCGECSSGAE*