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scnpilot_p_inoc_scaffold_4_32

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 38582..40597

Top 3 Functional Annotations

Value Algorithm Source
CHASE4-family GGDEF/EAL protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H226_CAUCN similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 567.0
  • Bit_score: 463
  • Evalue 4.60e-127
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 567.0
  • Bit_score: 463
  • Evalue 1.30e-127
GGDEF family protein {ECO:0000313|EMBL:AAK22842.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentu similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 567.0
  • Bit_score: 463
  • Evalue 6.50e-127

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Taxonomy

Caulobacter vibrioides → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2016
ATGGACAGCAGGAATTCGCCGCAGGAAGCCCAGCGCAAGGGGCTGCTGCGTCCGATCAACGGATTGGTGGTCGCGGCGATTCTCATGCTGGTGGGCGCAACGACCTTTACCCTGATACGGATGGGCAAGGGCGCCAATGACTATGAATTCGGCATTATCAACCGCAGCTGGCAGCACAATGTGCAGCAATGGCAGGCCAGCGGCCAGACGCTGATCCGTCAGGACGAGGCGCCCGCCCGTCTGGCGGCGGACGACCGGCGCTGGATCGAACAGGCCGTTCTGGCCCCGATGCGCACGCAGATCGGGTCCGCACAGGTCCGGCTGGAACCGGCCGAACCGGCGGACAAGGCGGTGGCGCTGCGCCTCGTCCATGGCACGGCCATCCTTTCGCTGCCCATGACCGCGCGGACGCCGGCCGGCGCGCCTGCGCCCTATGTGCTGCGCGTGGCGGTGGATCAGGGGCTGGTTTCGCAATTCGGCGGCCAGCATGGACAGGTCCATCTCCTGCTGCCCAAGGGCAAACCGCCGATCAGCGGCTATCACATCATGCCCCTGACCAGCCCCGACGGCCAATTGGTGGCCTCGCTGGCATGGCCCGCGATCAATCCATTCAAGGCATCGGAAACCGAGATTCCTCAGATGCTGCTGGCTATTGCGGCGGCCTTCCTGATGCTGGTCTGGCTTTTCATGCGGCGCAGCAACACGATTGCCAGCGACCTGATCGCCAGCGAGGCGCGCGCGCGTCATCTGGCCTTTCACGACACGCTGACCGGATTGCCCAACCGGGCGATGATGTTTGACCGGCTGGGACAGCTTCTGGCCATGTCGCGCCGCTATGCCGGGGAAATGGCGGTCCATTGCCTCGATCTCGACCGGTTCAAGGAGGTCAATGACACGCTGGGCCATCATGCGGGCGACGAATTGATCCAGCAGGTCGCGCGGCGGCTGAGCGAATTGTGCCGCGATTCCGATACGGTGGCGCGGCTGGGCGGCGATGAATTCGTGATCCTGCAGCCCGAGGCCGATGGTTCGGGCGCCTCGCATCTGGCCCAGCGCGTGCTCAAACTGTTCGAAACGCCCTTTGTGCTGGAGGCGGGCGTGGTCGAGGTGGGGGTTTCCATCGGCGTCACGCTGGTGTCCAACCCGGAAATGGAACCGGCCGAGGCGCTGCGTCAGGCCGATCTGGCGCTTTATGGTTCCAAGGAAAACGGGCGCAACCGCGTCACCTTTTTCGAACCCGACATGGATGCCGCGCTGCGCATGCGGCGCAGTCTGGAAAGCGATCTGCGCAAGGCGCTGGCCGATGGCAGTCTGACCATGGTCTATCAGCCCCAGATGGACGGGCGCGGGGCGATCGACGCGATAGAGGCGCTGGTGCGCTGGAACCATCCCGAACGCGGCAGCATCGCCCCCTCGATCTTTGTGCCCCTTTGCGAGGAAAGCGGGCTGATCCTCGATCTGGGCGAATTCGTGTTCCGCCGCGTGTTTGAGGAAACCGCCGGATGGGGCGACATCCGTGTGGCGATCAATGTCTCGGCGCTGCAATTGCGCTCGCCCATGTTCATGGCGACGTTGACGCGGCTGGTGGCCGAATTCCGGGTCAATCCCGAACGCTATGAAATCGAGATCACCGAAACCGCCTTGCTGGGCGATGACGGCATCACGCGCGACAATATCACCATGCTGAAACAGGAAGGCTTTTCCATCGCACTCGATGATTTCGGCACCGGCTATTCCAGCCTCAATTCGCTCAAGCGCTTTTCGGTCGACAAGATCAAGATCGACCGCAGCTTTGTCCATAACCTTGAGGCCAATGACGAGGCCGAAGGGCTGGTCGATGCCATCGTCAAGCTGGGCCGCGCGCTCAAACTGGATGTCGTGGCCGAGGGCGTGGAAACCGAGCATCAGCGCGACCGTCTGGCCGCCTGCGGATGCAACACGTTTCAGGGCTTCCTGGTCTCGCGCCCGGTGCCCGCAGCCGAGCTGAACGGGCTGTTTTCCGGCCATAATCCGTAA
PROTEIN sequence
Length: 672
MDSRNSPQEAQRKGLLRPINGLVVAAILMLVGATTFTLIRMGKGANDYEFGIINRSWQHNVQQWQASGQTLIRQDEAPARLAADDRRWIEQAVLAPMRTQIGSAQVRLEPAEPADKAVALRLVHGTAILSLPMTARTPAGAPAPYVLRVAVDQGLVSQFGGQHGQVHLLLPKGKPPISGYHIMPLTSPDGQLVASLAWPAINPFKASETEIPQMLLAIAAAFLMLVWLFMRRSNTIASDLIASEARARHLAFHDTLTGLPNRAMMFDRLGQLLAMSRRYAGEMAVHCLDLDRFKEVNDTLGHHAGDELIQQVARRLSELCRDSDTVARLGGDEFVILQPEADGSGASHLAQRVLKLFETPFVLEAGVVEVGVSIGVTLVSNPEMEPAEALRQADLALYGSKENGRNRVTFFEPDMDAALRMRRSLESDLRKALADGSLTMVYQPQMDGRGAIDAIEALVRWNHPERGSIAPSIFVPLCEESGLILDLGEFVFRRVFEETAGWGDIRVAINVSALQLRSPMFMATLTRLVAEFRVNPERYEIEITETALLGDDGITRDNITMLKQEGFSIALDDFGTGYSSLNSLKRFSVDKIKIDRSFVHNLEANDEAEGLVDAIVKLGRALKLDVVAEGVETEHQRDRLAACGCNTFQGFLVSRPVPAAELNGLFSGHNP*