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scnpilot_p_inoc_scaffold_4_43

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(52398..53807)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L1T6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 483.0
  • Bit_score: 429
  • Evalue 4.00e-117
  • rbh
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:EIZ78239.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 483.0
  • Bit_score: 429
  • Evalue 5.60e-117
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 468.0
  • Bit_score: 377
  • Evalue 6.60e-102

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGACCCGTTTGCCGCTGATGATTGCTGTGGGATTGCCGCTGGCGTTGCCGTTGGCTTTGGGGGGCTGCGCGCTGGGGCCGGATTATGCCGGGCCGCCCAAGGTGGCCGGCGGACAGAGCTTTGCGCGCGGGGCTGCGGCGGTCGAGGCGGGGCCGGTGCTGGCGCGCTGGTGGGAAGTGCTGGGCGATGAGCAGCTCAATGTGCTGGTCGGGGATGCCCTGGCCCACAGCCCCAGCGTCGAGGATGCGCAGGCCAAGGTGCGCGAAGCGGGCGCGGTCCTGCGGCAAAAGCAGGCCAGCGATCTGCCCTCGGTGGCGCCCACGCTGATCGCGGCCAAGGCTGATCTTCCGCCGTTCAGCGCAGGGGGCAAGCGGACCTCGCTCGAAATCTACAACCTTGGCGCGACCGCCTCGTGGGAGCCCGATTTCTGGGGCATCAACAAGCGCACCAATGAAGCCTCGCGCGCCAGTGTCGATCGGGCCAAGGCGCAATTGGCCGATGCGCAGGTCAGCCTCTCGGCGCAGGTGGCGCAGGCCTATGTGAACCTGCGCGATGCGCAAAGCAGGCAGGCGATGGTGGCGCAGGTGGTGGCCTTGCGCCAGCAGGCGCTCGATCTGGTCCGCCAGCGTCAGGGCGCGGGCGTGGCCACGCTGGCCGATGTGGCGCGCTCTGAGGGCGATATGCGCAGCGCCATGGCGCAGGCGGCTCCCTTGCGCGCGCAGGTCGAGGTGGCGATGAACCAGTTGGCCGTGCTGACCGGCAAGGCGCCGGGCGATCTGGACGCGGCTCTGGCTTCGGCCCGGCCATTGCCCGTGCTGCCCGCGAAAGTGGCGGTGGGCGATCCGGCGGAGCTGATCGCGCGGCGCCCCGATGTGCGCGCGGCCGAACGCCTGCTGGCGGGCAATACGGCGCAGATCGGCGCCACGCGGGGCAAGCTGATGCCGCGCCTGAGCTTTACCGGCATTCTGGGCATGGGCAGTTCTTCGCTCTCCAGCATCGTCGATCCGGCAACGGCGGCCTATGGCATATTGCCGCAGCTGAAATGGTCCGGCCTCGATTGGGGCAAGGGCCAGGCCACCGTGGCGCAGGCCAAGGCCCAGCGCGACAGCGCCGAGGCGCAATATCGCCGCGCGGTCCTTGCCGCGCTTGAGGATGCCGAGAGCAGCCTGTCGCGTTTCGGCGCGGCGCGCGAGCGACTGACGCAGCTTGAGGCGGGCGAGGGGACCGCGCGCACCAACGCGGGCCTTGGCGCGCAAAGGGTGAGCGCGGGGACATCCTCCAAGCTGGAGCAGACCGAGCGCGACGCGCAGGTCTTGCAGGCCGCGATCACCAGCGCGCAGGGCCGGGCCGAAGTGGTGGTGGATTATATCGCCATTGCCAAGGCGCTGGGCTTGGGCTGGCAGGGCTGA
PROTEIN sequence
Length: 470
MTRLPLMIAVGLPLALPLALGGCALGPDYAGPPKVAGGQSFARGAAAVEAGPVLARWWEVLGDEQLNVLVGDALAHSPSVEDAQAKVREAGAVLRQKQASDLPSVAPTLIAAKADLPPFSAGGKRTSLEIYNLGATASWEPDFWGINKRTNEASRASVDRAKAQLADAQVSLSAQVAQAYVNLRDAQSRQAMVAQVVALRQQALDLVRQRQGAGVATLADVARSEGDMRSAMAQAAPLRAQVEVAMNQLAVLTGKAPGDLDAALASARPLPVLPAKVAVGDPAELIARRPDVRAAERLLAGNTAQIGATRGKLMPRLSFTGILGMGSSSLSSIVDPATAAYGILPQLKWSGLDWGKGQATVAQAKAQRDSAEAQYRRAVLAALEDAESSLSRFGAARERLTQLEAGEGTARTNAGLGAQRVSAGTSSKLEQTERDAQVLQAAITSAQGRAEVVVDYIAIAKALGLGWQG*