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scnpilot_p_inoc_scaffold_4_45

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(55351..56442)

Top 3 Functional Annotations

Value Algorithm Source
HlyD secretion family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDG6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 366.0
  • Bit_score: 404
  • Evalue 8.10e-110
  • rbh
HlyD secretion family protein {ECO:0000313|EMBL:EIZ78241.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 366.0
  • Bit_score: 404
  • Evalue 1.10e-109
secretion protein HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 364.0
  • Bit_score: 374
  • Evalue 2.50e-101

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGACCGATACTTCCCAGGTGGCTGACCAGACGGCTGAATCCTCCGAAAGTTCCTCGTCCTCGCCCGCGCGCAAGGTGCTGCCCTTTGTCGGGCTGGCGCTTTTGCTGGGCGGCGGCTGGTGGGGCTGGGACTATTTCACCCATGGTCGCTATATCGAAGAAACCAATGACGCGCAGATCGCCGCCGACACGCTGGCCGTGGCCCCGCGCATCTCGGGCTATGTCGCGCAGGTTCTGGTTACTGACAATCAGGACGTGAAGGCGGGGACGCCTTTGCTCACGCTCGACCCGCGCGATTACAAGGCCAAGACCGCGCAGGCATCGGCGCAGGTAGCGATTGCCGAGGCGCTGCAGGCCAATGCGCAGGCCGCCATTGCCGAACAGCGCGCCGGGATCGAACAGGCCCGCGCCCAATTGGCCGCCGCGCAGGCCAAGGCGCAATTCGACGCCGATCAGGTCAAGCGCTTCACCCCGCTGGTGGCCAGCGGAGCCGAGCAGGCCCAGCAATTGTCGCAATTGCGCGCCGCCGCCGACCAATCCGCCGCGCAGGTCCGCGCCCAGACCGCCGCCATCGAGGCCCAGCAGCGCCGCATCGCCGCCATCGAGGCGCAGGCCAAGCAGGCCGTCGCGCAAGGGCTGGGCGGCAAGGCGCAGTTTGACGCGGCCAATGTCGATCTGGACGCCACCACCATCCGCGCCTCGATCGACGGGCGCATCGGCGACAAGAATGTCACGCCGGGCCAGTTCGTTTCGGCGGGCACGCGGTTGATGACGCTGGTGCCGCTTTCCAAGATCTATGTCGTGGCCAATTTCAAGGAAACGCAATTGGCCCATATGCGCCCCGGACAGAGCGTGTCGATCAAGGTCGATGCGCTGGACGGCCATGCGATCAAGGGCCGGATCGAAAGCATGGCGCCCGGCACCGGGGCCAGCTTCAGCCTGATCGCGCCCAGCAACGCGACCGGCAATTTCACCAAGATCGTTCAGCGCATTCCGGTGCGCATCGCGATTGACGCCAATGATGAAACGCGCCGTCTGCTGGTGCCGGGTCTGTCGGTGACGGCGATGGTGGACACGAAAACGGCGCGCTGA
PROTEIN sequence
Length: 364
MTDTSQVADQTAESSESSSSSPARKVLPFVGLALLLGGGWWGWDYFTHGRYIEETNDAQIAADTLAVAPRISGYVAQVLVTDNQDVKAGTPLLTLDPRDYKAKTAQASAQVAIAEALQANAQAAIAEQRAGIEQARAQLAAAQAKAQFDADQVKRFTPLVASGAEQAQQLSQLRAAADQSAAQVRAQTAAIEAQQRRIAAIEAQAKQAVAQGLGGKAQFDAANVDLDATTIRASIDGRIGDKNVTPGQFVSAGTRLMTLVPLSKIYVVANFKETQLAHMRPGQSVSIKVDALDGHAIKGRIESMAPGTGASFSLIAPSNATGNFTKIVQRIPVRIAIDANDETRRLLVPGLSVTAMVDTKTAR*