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scnpilot_p_inoc_scaffold_4_50

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(61228..62073)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator(With CheY-like receiver domain and winged-helix DNA-binding domain) n=1 Tax=Sphingomonas sp. LH128 RepID=J8W060_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 269.0
  • Bit_score: 351
  • Evalue 8.30e-94
  • rbh
Response regulator(With CheY-like receiver domain and winged-helix DNA-binding domain) {ECO:0000313|EMBL:EJU13086.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 269.0
  • Bit_score: 351
  • Evalue 1.20e-93
response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 284.0
  • Bit_score: 268
  • Evalue 2.00e-69

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGCAGGCCACACACAACGCCATGGATCTGGCGACCAAAATCCTGATCGTTGATGATGACAAGGGCATCAGGACGGTCGTGTCCGAATTTCTGGGCAAGCATGGCTATCAGACAGCCACGGCGGCCAATCCGGTCGAAATGCGCCGGATGCTCGAGGCCGGTTCGTATGATCTGATCGTGCTGGACGTGATGATGCCCAAGGAGGACGGGCTGACCGCGCTGCGCAGCCTTGGGCCCCAAGCGCCGCCGGTGATTATGCTCAGCGCCGTGGGATCGGATATCGACCGCGTGGTCGGGCTGGAAATGGGCGCCGACGATTATCTGGCCAAACCGTGCAACCCGCGCGAATTGCTGGCGCGCATCCGCGCCGTGCTGCGGCGCAAGGCGGCGGCGCAGGCGGTGCTGGATCAGGCGATGGAAATCCGCGCCGGAGGAGCAGAAGCGCCCCCGGCCGATGCCGCTGCGGCCGAAGGCGCGCCCGGCCCCTCGCAGGATCAGGCCGGGGCGACATGCGCCAATGGCCTTTATTTCGAAGGCTGGCGGATGGATCTGGACATGCGGCTGCTGTTCGATCCCGATGGGCGGATGATCACGCTGACCGAAGGCGAGTTCCGCCTGCTGCTGGCCTTTGCCCAGCATCCGCGCCGGGTGGTGACGCGCGACCAGTTGCTGGAATGGTCACGCGGGGGGGATGCTGATCATTTCGACCGCGCGATCGATGTGCAATTGTCGCGCCTGCGCCGCAAGATGACCGATGCGGGCAGCAGCGGCGTGTCCGAGCTGATCCGCACGGTGCGCAATGAGGGCTATGTCTTTGTGCCGCATGTCACGCGGACGCACGGCTGA
PROTEIN sequence
Length: 282
MQATHNAMDLATKILIVDDDKGIRTVVSEFLGKHGYQTATAANPVEMRRMLEAGSYDLIVLDVMMPKEDGLTALRSLGPQAPPVIMLSAVGSDIDRVVGLEMGADDYLAKPCNPRELLARIRAVLRRKAAAQAVLDQAMEIRAGGAEAPPADAAAAEGAPGPSQDQAGATCANGLYFEGWRMDLDMRLLFDPDGRMITLTEGEFRLLLAFAQHPRRVVTRDQLLEWSRGGDADHFDRAIDVQLSRLRRKMTDAGSSGVSELIRTVRNEGYVFVPHVTRTHG*