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scnpilot_p_inoc_scaffold_4_96

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(114553..115137)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B306F7 similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 185.0
  • Bit_score: 321
  • Evalue 8.30e-85
  • rbh
dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 190.0
  • Bit_score: 339
  • Evalue 4.80e-91
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AJP74795.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 190.0
  • Bit_score: 339
  • Evalue 2.40e-90

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGTCATGGATTTATCTGTTTCTCCTGTTCGTTTGATAAAGCCGCGCCGTCATGGCGATGCGCGTGGCTGGTTTACCGAGGTTTATTCCGAGCCTGCGTTTGCCGAGTTGGGCATTACCTGCCGCTTTGTACAGGACAATCACTCGCTCTCGGTGCCGGCCTTTACCCTGCGTGGCCTGCATTTTCAGACGCCCCCCCGGGGCCAAGACAAGCTGGTGCGCTGCATTCGCGGGCGCATTTTCGATGTGGCGGTCGATGTGCGGGCGGGCTCACCCACCTATGGCCAGTGGGTGGGGGCGGAACTGTCGGCACAGAACGGGCATCAACTGTTCATCCCCATCGGCTTTGCTCACGGTTTCCTGACGCTGGAGACCGATTGCGAGGTTACCTACAAATGCTCTGACACTTATGCGCCAGCGCATGATGGCGGCATCCGCTGGGATGATCCGGCGATCGGCATTGACTGGCCGCTGCCTTCGGGCGCCGTGCCCGAAACCTCGCCCAAAGATGGCGTGCAGCCCTTGCTGGCTGACTTTGCCAGCCCCTTTACCTATAATGGCCGCCCGCTCTTGCCGCTGGCCTAA
PROTEIN sequence
Length: 195
MVMDLSVSPVRLIKPRRHGDARGWFTEVYSEPAFAELGITCRFVQDNHSLSVPAFTLRGLHFQTPPRGQDKLVRCIRGRIFDVAVDVRAGSPTYGQWVGAELSAQNGHQLFIPIGFAHGFLTLETDCEVTYKCSDTYAPAHDGGIRWDDPAIGIDWPLPSGAVPETSPKDGVQPLLADFASPFTYNGRPLLPLA*