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scnpilot_p_inoc_scaffold_4_108

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 130287..131471

Top 3 Functional Annotations

Value Algorithm Source
capsule polysaccharide transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B67F43 similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 369.0
  • Bit_score: 521
  • Evalue 8.40e-145
  • rbh
capsule biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 364.0
  • Bit_score: 444
  • Evalue 3.70e-122
Capsule polysaccharide export protein {ECO:0000313|EMBL:EHJ58185.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 343.0
  • Bit_score: 420
  • Evalue 3.70e-114

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Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGAAGCTCCATAATTCGTTTTTGCGTGATACCACTCTGGCACTGAGTGGCCGCACGACCTTGCTGCTGGGTGGCTGCGCTACCTTGTTTCTCGGTGGCTGCGCCACCTTGCCCTCAAGCGGCCCGACTGGTGCCGAAGTGAAAAAAAGCGTGATCAAAGAGGCGCCGCTGGGCCTCTCGCTGGTCGAAGTGTATGACCAAGCCTCTGTGCCGGCACCGCAGGCCGCAACCGGGCCACACCTCACCGTTCTGCCCGCACCTCCTACCGACATGGTCGGGCCAGGCGACGTGCTGGGCGTGGCGATCTATGAAGCGGGCGTGACACTGTTCTCGGGCCCACAGGCTAGTGTGGGCGGCATGGCAGCAACCATGGCCGACGCTGGCGCGCGCGCGCAGACACTGCCCGAATTACGCATCAATGATGATGGCGACATCACCATCCCCTATGCTGGCAAGCTCCACGTTGCGGGCAAAACACCCGCCGAGATCCAGACCCAGATCAGGCAGGCGCTTCGCGGTTTCTCGCAAAACCCCCAGGTTCTGGTGACCCGCCGCGAGGTGATTAGTAATTCGGTGATCGTGGGCGGCGAAGTGGCGCGCCCGGGCAGGTTGGTGCTCAACACCAATCAGGAGACCCTCTCAGACGTTGTGGCGCTGGCCGGTGGCTATCGCGGGCGAGCGAGCGACATCATCCTGCGCATCAAGCGCCGCGATCAAAGCGCGAATGTACGGCTGAGCACCCTCCTAGACAATCCTGACCTTGATGTCCGAGTCTATCCGGGTGACCGCTACACGCTCATTGCCGCGCCGCTGACCTTCTCGGTGTTGGGCGCGGCCGGGCGGATGGAACAGCTCCCCATTGCCAGCGGCAGGATGACACTTGCCGAGGCCGTCTCGGCGGCCGGCGGCCCCAACCCCTATTCTGGGGACCCCGCGGCGATTTTCGTGTTCCGCTATGTGGTTGATCCCGACCATCCGAGTGCCCGCCGACCAGTGGTCTATCACATCAACATGAAGCACGCTGGCAGCTATTTCCTGGCGCAGAACTTTACTATGCAGGACAAGGATGTGTTGTATGTCGGCAATGCCCGCGCCAACCAGCCTTCCAAGCTCGTTCAGCTGATCAGCCAGCTCTTCTCACCGGTCATCGCGGTAACGAGCGGAATGCAGGCGCTCAAGAATTGA
PROTEIN sequence
Length: 395
MKLHNSFLRDTTLALSGRTTLLLGGCATLFLGGCATLPSSGPTGAEVKKSVIKEAPLGLSLVEVYDQASVPAPQAATGPHLTVLPAPPTDMVGPGDVLGVAIYEAGVTLFSGPQASVGGMAATMADAGARAQTLPELRINDDGDITIPYAGKLHVAGKTPAEIQTQIRQALRGFSQNPQVLVTRREVISNSVIVGGEVARPGRLVLNTNQETLSDVVALAGGYRGRASDIILRIKRRDQSANVRLSTLLDNPDLDVRVYPGDRYTLIAAPLTFSVLGAAGRMEQLPIASGRMTLAEAVSAAGGPNPYSGDPAAIFVFRYVVDPDHPSARRPVVYHINMKHAGSYFLAQNFTMQDKDVLYVGNARANQPSKLVQLISQLFSPVIAVTSGMQALKN*