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scnpilot_p_inoc_scaffold_4_119

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(142688..143965)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 425.0
  • Bit_score: 565
  • Evalue 5.90e-158
tRNA modification GTPase MnmE n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBI0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 425.0
  • Bit_score: 555
  • Evalue 4.40e-155
  • rbh
tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 425.0
  • Bit_score: 555
  • Evalue 1.20e-155

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGACGGACACGATTTTTGCCTGCTCCAGCGGGATGCCTCCGGCTGCGATTGCGGTGATCCGGATCAGCGGGCCGCAGGCGGGCGCGGCGTTGATCGCGCTGGGCGGACGCTTGCCCGTGGAGCGGCGTGCAAGCCTGATGGTGCTGCGCGATGGGGCAGGGGCGGAACTGGACCGGGCGCTGGTCCTGTGGTTTCCCGGCGCGCGGACGGCGACGGGCGAGGATTTGGCCGAGATCCATTGTCACGGCGGACGCGCGGTGATCGCGGCCTTGGAACAGGCGCTGGCGGCTCTGCCGGGCCTGCGCCGCGCCGAGGCCGGCGAATTCACACGGCGCGCATTCTTGAACGGGCGTATGGATCTGGCCGAGGCCGAAGGGCTGGGCGATTTGCTCTCCGCCGAGACGGAGATGCAGCGACAGGCGGCGGTGGCGATGGCGGGCGGTGCTTTGTCGGTTGTGGTCAAGGGCTGGCGCGAGCGTGTGCTGATGCTCTCGGCTCAGGTTGAGGCTGTGCTCGATTTTGGCGATGAGGATGACGTTGGCGCGCTGCCCGCTTCCTTCGCTTCGACGCTGGCGATGTTTCACGTGGAACTTTGCGAATGGCTGTCCCGCCCGCGCGCCGAGGCTCTGCGCGAAGGGTTTCGCGTTGTGATCGCCGGGCCGCCCAATGCGGGCAAGAGCACCTTATTTAACGCGCTGGTCGAGGATGATGCCGCGATCATCACGCCGCTGGCCGGAACCACACGCGACATTTTGATGCGCCCGGTGGCGCTGGGCGGGGTGCCGTTTCAGTTTCTCGATACGGCAGGCCTGCGTGACGACGGCGCGGATGTGGTGGAAAGCATCGGCATCGAACGCGCCCGCGAAGTCATGGCGCGGGCCGATCTGGTCCTCTGGCTGGGGCCGGAGGGCGAGGGGCCGGAGGGCGCGTGGGAGATCGAATCCCGGATCGACGCCGCCGTGCGCATGGCCAAATCCGCCCCCCGCCATCGCCTCTCGGGCAAGACCGGGCAAGGGGTGAATGCCCTGCGGCAGGACCTGATCGCCACCGCCCGGATGGCCATGCCCAAGCCCGGACAGGTGGCCCTGAATGCCCGCCAGTATGGTTTGCTTTCCGAAGCCGCCTCCGCTTTGGCGACCATTCGCCCCGATGGCGACCTGCTGCTGACCGCCGAAGATCTGCGCGCCGCGCGTTCCGCCTTCGACCGTTTGCTGGGCGGGGCGGGGACGGAGGATATGCTCGACGCTTTGTTTGGACGCTTCTGCATCGGAAAATAA
PROTEIN sequence
Length: 426
MTDTIFACSSGMPPAAIAVIRISGPQAGAALIALGGRLPVERRASLMVLRDGAGAELDRALVLWFPGARTATGEDLAEIHCHGGRAVIAALEQALAALPGLRRAEAGEFTRRAFLNGRMDLAEAEGLGDLLSAETEMQRQAAVAMAGGALSVVVKGWRERVLMLSAQVEAVLDFGDEDDVGALPASFASTLAMFHVELCEWLSRPRAEALREGFRVVIAGPPNAGKSTLFNALVEDDAAIITPLAGTTRDILMRPVALGGVPFQFLDTAGLRDDGADVVESIGIERAREVMARADLVLWLGPEGEGPEGAWEIESRIDAAVRMAKSAPRHRLSGKTGQGVNALRQDLIATARMAMPKPGQVALNARQYGLLSEAASALATIRPDGDLLLTAEDLRAARSAFDRLLGGAGTEDMLDALFGRFCIGK*