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scnpilot_p_inoc_scaffold_4_121

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(144540..145796)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1088721 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 418.0
  • Bit_score: 784
  • Evalue 6.10e-224
Transcription termination factor Rho n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBH4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 418.0
  • Bit_score: 784
  • Evalue 4.30e-224
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 418.0
  • Bit_score: 784
  • Evalue 1.20e-224

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Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCATTTGAAAGAATTGAAGAAAAAGACTTCGGCCGAGCTGGTCGAGATGGCCGAGGAATATGGCGTGGAAAGCGCCAGCACCTTGCGCCGCCAGGATCTGATGTATGCGATCCTGAAGGAAGTGGCCGAGGATGGCGAAGAGATCATCGGTCAGGGCACGATCGAAGTGCTGCCCGACGGCTTTGGCTTTTTGCGCAACCCGGAGGCCAACTATCTGGCCGGGCCGGACGACATTTATGTCTCGCCCAATCAGGTCCGCAAGTGGGGCCTGCGCACGGGCGACACGGTGGAAGGTGAAATCCGCGCCCCCAAGGATGGCGAGCGCTATTTCGCGATCACCAAGCTGGTCAGCGTCAATTTCGACAATCCCGAAGCGGTGCGCCATCGCGTCAACTTCGACAACCTGACCCCGCTCTATCCGAACGAGCGCCTCAAGCTCGACACGCTCGACCCCACGGTCAAGGACAAGTCGGCCCGCGTGATCGACCTGATCTCGCCTCAGGGCAAGGGCCAGCGCGCGCTGATCGTCGCCCCGCCGCGCACGGGTAAGACCGTGCTGCTGCAGAACATCGCCAAGGCGATCACCGACAACCACCCCGAAGTGTTCCTGCTGGTGCTGCTGGTCGACGAACGCCCCGAAGAAGTGACCGACATGCAGCGCAGCGTGAAGGGCGAGGTCATTTCCTCGACCTTTGACGAACCGGCGCAGCGCCACGTGCAGGTGGCCGAAATGGTCATCGAAAAGGCCAAGCGCCTGGTTGAACACAAGCGCGATGTCGTCATCCTGCTCGACTCGATCACCCGTCTTGGCCGCGCCTACAACACTGTCGTTCCTTCGAGCGGCAAGGTGCTGACCGGCGGCGTTGACGCCAACGCCCTGCAGCGCCCCAAGCGCTTCTTCGGCGCCGCGCGTAACATCGAAGAAGGTGGCTCGCTCTCCATCATCGCCACCGCGCTGATCGACACCGGTAGCCGCATGGACGAAGTGATCTTTGAAGAATTCAAGGGCACGGGTAACAGCGAAATCGTCCTCGACCGCAAGGTTGCCGACAAGCGTATCTTCCCCGCGCTCGACGTGGGCAAGAGCGGCACCCGCAAGGAAGAACTGCTGGTCGAAAAGGGCAACCTCTCGAAGATGTGGGTCCTGCGCCGCATCCTCATGCAGATGGGCACCGTCGACGCGATGGAATTCCTGCTCGACAAGATGAAGGATTCCAAGACCAACGAGGACTTCTTCGCGACGATGAACCAGTAA
PROTEIN sequence
Length: 419
MHLKELKKKTSAELVEMAEEYGVESASTLRRQDLMYAILKEVAEDGEEIIGQGTIEVLPDGFGFLRNPEANYLAGPDDIYVSPNQVRKWGLRTGDTVEGEIRAPKDGERYFAITKLVSVNFDNPEAVRHRVNFDNLTPLYPNERLKLDTLDPTVKDKSARVIDLISPQGKGQRALIVAPPRTGKTVLLQNIAKAITDNHPEVFLLVLLVDERPEEVTDMQRSVKGEVISSTFDEPAQRHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDVGKSGTRKEELLVEKGNLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMNQ*