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scnpilot_p_inoc_scaffold_4_126

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 149503..150360

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 292.0
  • Bit_score: 344
  • Evalue 1.10e-91
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 289.0
  • Bit_score: 325
  • Evalue 1.80e-86
Shikimate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU84_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 292.0
  • Bit_score: 346
  • Evalue 2.70e-92

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
GTGAACGAGATTACAGCGCCCACGCGGCCCTTTGCCGAAGTGATCGGCGATCCGATTGCCCAATCCAAATCGCCCGCGATTCATGGCCATTGGCTCGAACGGCTGGGGCTGGAGGCTGATTACGGCCGCGCCCATGTGCTGCCCGCCGATTTGCCCGCCTATGTTGCCGCGCGCCGGGCCGAGCCTCTGTGGCGCGGCTGTAATGTCACCATGCCGCATAAGCAGGCGATCATCCCCCTGCTCGACGGGCTGGACCCGCTGGCGGCGCGGATCGGCGCGGTCAATACGGTGGCGGTGAAGGAAGATGGGCGGCTGATCGGCTATAACACCGATGCGCCGGGCTTTATCGAGCCTTTGCTGCCGGTGCTGGGCGATGAGCTGGCGCCGGAAAATGCGCTGGTGATCGGGGCGGGCGGCGCGGCGCGGGCGATTGTCGTGGCGCTGGCCGATGCGGGGATAGCGATTACGCTGGCCGCGCGCGATTCCGATAAGGCGCGGGATTTGCTTGATGAACTGGCGCCGGGCGCGCGGCACAGGGCGGCGGAGCTGGGGGATTTTGCTCGCGGCGGCGATGGCGAATTCGGCATGATCGTCAATGCCAGCCCGCTGGGCATGGTGGGTAATCCGCCTTTGGTGCTGGATCTGAGCCATGGGCGGCCTGCGGCGATTGTTTATGACATTGTCACCGCGCCGCTCGAAACGCCTCTGCTGGCCGCCGCGCGGGCCGAGGGGATGCGCTGCATCGACGGGCTGACCATGCTGATCGGTCAGGCGGGAATCGCGTTTGAGCATTTCTATGGCGCCGATCCTGCGCGTGAGCGGGGCGATGTGGCCCTGCGCGCGATTCTGACGGCATGA
PROTEIN sequence
Length: 286
VNEITAPTRPFAEVIGDPIAQSKSPAIHGHWLERLGLEADYGRAHVLPADLPAYVAARRAEPLWRGCNVTMPHKQAIIPLLDGLDPLAARIGAVNTVAVKEDGRLIGYNTDAPGFIEPLLPVLGDELAPENALVIGAGGAARAIVVALADAGIAITLAARDSDKARDLLDELAPGARHRAAELGDFARGGDGEFGMIVNASPLGMVGNPPLVLDLSHGRPAAIVYDIVTAPLETPLLAAARAEGMRCIDGLTMLIGQAGIAFEHFYGADPARERGDVALRAILTA*