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scnpilot_p_inoc_scaffold_4_135

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 156454..156861

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCB6_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 124.0
  • Bit_score: 192
  • Evalue 2.40e-46
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 126.0
  • Bit_score: 199
  • Evalue 3.50e-48
Iojap-like protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 124.0
  • Bit_score: 192
  • Evalue 6.70e-47

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCCCGAACCTATCACCCCTTCGACCGCCATCCCGGCGGCGAAACCCGTTTCAACGCTGCCCGAATCCATTCCCGGTTCGCTGCATGCGCTGATCCTGCAATCGCTTGACGACGATCAGGCGCAGGAAATTGTCTCCATCCCGCTGGAAGGCAAGACCTCGGTGGCCGATCACATGGTGATCGCATCGGGCCGTTCCACGCGTCAGGTGGCCGCGATGGCCCAGCATCTGGCCGAGCGTATCAAGCATGGCGGCTTTGGCCATGTCCGCATCGAAGGTCTGCCCGCGGCGGATTGGGTGCTGATCGATGCTGGCGATATTGTCGTCCATCTGTTCCGTCCCGAAGTGCGCAATTTCTACAATCTGGAACGCATGTGGGGCTTTGACGGACCCAGCGGTGCGGCCTGA
PROTEIN sequence
Length: 136
MPEPITPSTAIPAAKPVSTLPESIPGSLHALILQSLDDDQAQEIVSIPLEGKTSVADHMVIASGRSTRQVAAMAQHLAERIKHGGFGHVRIEGLPAADWVLIDAGDIVVHLFRPEVRNFYNLERMWGFDGPSGAA*