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scnpilot_p_inoc_scaffold_4_204

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(222682..222972)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=2 Tax=Novosphingobium RepID=F6IKG0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 93.0
  • Bit_score: 171
  • Evalue 5.30e-40
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrob similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 95.0
  • Bit_score: 173
  • Evalue 1.10e-40
50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 93.0
  • Bit_score: 171
  • Evalue 1.50e-40

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGTCCCGTATTTGCGAACTGACTGGCAAAGGCCGCCAGGTCGGCCACAACGTCAGCCACGCCAACAACAAGACCAAGCGCGTGTTCCTGCCCAACCTGCAGAACGTTACGCTTCTGTCGGAAGGTCTTGACCGCAGCTTCAAGTTCCGCGTCTCGACCCACGGCCTCCGCTCGGTGGAACACGTGGGCGGCCTCGACAACTGGCTGCTCAAGAGCTCCGACGACAAGCTAAGCCCGCGCGCCGTCAAGGTGAAGCGCGAGCTGGCCAAGAAGGCCGCTATCGCCGCTTAA
PROTEIN sequence
Length: 97
MSRICELTGKGRQVGHNVSHANNKTKRVFLPNLQNVTLLSEGLDRSFKFRVSTHGLRSVEHVGGLDNWLLKSSDDKLSPRAVKVKRELAKKAAIAA*