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scnpilot_p_inoc_scaffold_4_221

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(238369..239538)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 375.0
  • Bit_score: 619
  • Evalue 3.20e-174
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Sphingomonas sp. LH128 RepID=J8VKN7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 377.0
  • Bit_score: 619
  • Evalue 2.90e-174
thiouridylase similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 384.0
  • Bit_score: 605
  • Evalue 1.20e-170

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGGGCCGATCATGGCCCATGATTCCCCCTCTGTGTTAACACCCGCCGCGCTCCTTGATCTGTTTGATCTTGGACAAAATGTAAAAATGCGTCGAATCGTTGTCGCCATGTCGGGGGGTGTAGACTCATCCGTGGTGGCCGCTCTGGCCGCGCACAGCGGAGCCGAGGTGATCGGCATCACACTGCAGCTTTACGATCATGGCGAGGCGGTCAAGCGCAAGGGCGCGTGCTGCGCGGGCGATGATATCCGCGACGCGCGCGAGGTGGCCGACCGGCTTGGCATCGCGCATTATGTTTACGACCATGAATCCGCATTTCGCGAAAGCGTGGTTGATCGTTTTGCCGAAGATTACCTCAACGGACGCACGCCGATTCCCTGCATCCGCTGCAACATGGGGCCAAAGTTCACCGACCTTTTGACCATGGCGCGCGATCTGGGGGCCGATTGTCTGGCCACCGGGCATTATGTGCGGCGCGTGATGGGGGCGGCGGGGCCGGAATTGCACCGCGCGCTCGATCCCGCGCGCGACCAGTCCTATTTCCTTTACGCCACCACCGAGGCGCAGCTCGACTTCCTGCGCTTCCCTCTTGGCGGCCTGCCCAAGACGCAGGTGCGCGAACTGGCCGACCATTTCGGCCTCAAGGTCGCGGCCAAGCCCGATTCGCAGGACATCTGCTTTGTGCCCGAGGGCGATTACGCCAGCGTGGTGCGCAAGATCCGCCCCGAGGGCGAGCGCCCCGGCGATATCGTCCATGCCCAAACAGGCGCGGTGCTGGGCCACCATCGCGGCGTGATCCATTATACGGTGGGCCAGCGGCGGGGCCTTGAAATCGGCGGCCTGCCCGAGCCCGTCTATGTGGTGGGCATTGATGCGCCCGGCGCGCGGGTGCTGGTGGGGCCGCGGGCGATGCTGGCGGTGTCGGCGGCGCGGATTGTCGAAACCAACCGCATCGGGCCAGTGCCCGAAGGCGCGGCGCTGACCGCCAAGGTGCGCTCGCTGGCCAAGCCTGTGCCGGTGACGCTGGACGGGCCGCTGGGCGATGGGGCCGATACCACGATCCGCTTTGCCAGCCCCGAATATGGTGTCGCCCCCGGACAGGCCGCGGTGATCTATGCGGGCGACCGGGTGATCGGCGGCGGCTGGATCGAGGAAACCTTCGCCGCCTAA
PROTEIN sequence
Length: 390
MGPIMAHDSPSVLTPAALLDLFDLGQNVKMRRIVVAMSGGVDSSVVAALAAHSGAEVIGITLQLYDHGEAVKRKGACCAGDDIRDAREVADRLGIAHYVYDHESAFRESVVDRFAEDYLNGRTPIPCIRCNMGPKFTDLLTMARDLGADCLATGHYVRRVMGAAGPELHRALDPARDQSYFLYATTEAQLDFLRFPLGGLPKTQVRELADHFGLKVAAKPDSQDICFVPEGDYASVVRKIRPEGERPGDIVHAQTGAVLGHHRGVIHYTVGQRRGLEIGGLPEPVYVVGIDAPGARVLVGPRAMLAVSAARIVETNRIGPVPEGAALTAKVRSLAKPVPVTLDGPLGDGADTTIRFASPEYGVAPGQAAVIYAGDRVIGGGWIEETFAA*