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scnpilot_p_inoc_scaffold_4_231

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 252919..254319

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA71_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 466.0
  • Bit_score: 574
  • Evalue 1.30e-160
  • rbh
Transcriptional regulator of XRE family {ECO:0000313|EMBL:GAO54998.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 468.0
  • Bit_score: 589
  • Evalue 3.20e-165
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 466.0
  • Bit_score: 574
  • Evalue 3.70e-161

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGAAAAGGCGGCTCTATGCGGGGCGATTCCTTAAAGCCCTGCGCGAGGACCATGGCCTGAAACAGGGCGCACTGGCGCAAAGGCTGGGGATCAGCACGCCCTATCTCTCGCAATTGGAAAATGACACGCGGCCGATGACCTTGGCGCTGGCCGAAAGGGTGCGCGAAATCTTCCCGGTGGATTGGGCCGACATGGCCGAAACCCCGGTCGAGCCCGTTGTCACCGAATTGCTGGAGGCCTCTGCCGATCCGTTGCTGGGCGACCTGCCCGCCGATCAGATCGAACGCGTGGCCGACCAGTTCCCCCAATTTGCCGAGCAATTTGCCCATCTCTACCGCCTGCACAAACGCGATTCGCAGCGTCTGGCCGCGATGGATGAAGCCTTGGGGGCCGACAGCGTGTCGGGCGGACGCCTGCCGTGGGAGGAGGTGCGTGACTGGTTCCATCTGGCCGACAATTACGTCCATCTGATCGATTCCAGCGCCGAGGCCATGGCAGGCGCCCTTGCGCGCCATCTGCCTACGCCCGACACCGCGCAATTGACCGCATGGTTCGAGCGGCAGGGCATCACCCTGCGCCATCTGCCCGGCGCGCCGATCCGCCGCTATGACGAGGCCCGCCGCGAACTGACGCTGGATGCGGGCCAGCCCCATGAGAGCCTGCGCTTCCAACTGGCCTATCAGCTTTGCGCCATCGCGCTGGCGCAGGAGATCGCCGAGACGGTGGAAAAGGGCGGGATGCGAACGCAAACCGCGCGCAATCTGCTTTCGGTGGGGCTTACCAATTATGCGGCGGGGGCTTTGCTGATGCCCTATCGCCCGTTTCGCGATGCGGCGCGGCGGCTGCGCCATGATATTGACGGCTTGCGCCAGATTTTCGGCACCAGTTTTGAACAGACCTGCCACCGCCTGTCCAACCTGCAACGGCCCCACCAGCGCGGCGTGCCGATCGCCTTTTGCCGGATCGACATGGCGGGCAATATTACGAAGCGCCACGCGGCCAACGGGTTGCAATTCGCGCGTTTCGGCGGCGCCTGTCCGCTGTGGATCGCGCATGAGGCCGTGGCCATCCCCGACCGCATCCATCTGCAAGTGGCCGAGATGCCCGAGGGGCGGCGCTTTGTCTTCCTCGCCAAGGGGCTGGTCAAACCCTCGGACGCCTATTTCCGCCCGCCGCGCCGCTATGCGGTGGTGCTGGGGTGTGAAGTCACGCTGGCCAGCGAGTTCATCTATGCCGACACGCTCAATCTGGAATGCGAGGAGGCGGTGGCGCGGATCGGCATTTCCTGCCGCATCTGTTCGCGCCACGATTGCCATCAGCGCGCCTATCCGCCCAATGACAAGCCCATCGACATCACCACGAACCAGCGCGGCTTCATCCCCTATCGCATTCTGGATTAA
PROTEIN sequence
Length: 467
MKRRLYAGRFLKALREDHGLKQGALAQRLGISTPYLSQLENDTRPMTLALAERVREIFPVDWADMAETPVEPVVTELLEASADPLLGDLPADQIERVADQFPQFAEQFAHLYRLHKRDSQRLAAMDEALGADSVSGGRLPWEEVRDWFHLADNYVHLIDSSAEAMAGALARHLPTPDTAQLTAWFERQGITLRHLPGAPIRRYDEARRELTLDAGQPHESLRFQLAYQLCAIALAQEIAETVEKGGMRTQTARNLLSVGLTNYAAGALLMPYRPFRDAARRLRHDIDGLRQIFGTSFEQTCHRLSNLQRPHQRGVPIAFCRIDMAGNITKRHAANGLQFARFGGACPLWIAHEAVAIPDRIHLQVAEMPEGRRFVFLAKGLVKPSDAYFRPPRRYAVVLGCEVTLASEFIYADTLNLECEEAVARIGISCRICSRHDCHQRAYPPNDKPIDITTNQRGFIPYRILD*