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scnpilot_p_inoc_scaffold_4_288

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(309952..311388)

Top 3 Functional Annotations

Value Algorithm Source
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:GAO54863.1}; EC=1.4.1.13 {ECO:0000313|EMBL:GAO54863.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 478.0
  • Bit_score: 841
  • Evalue 8.20e-241
glutamate synthase (NADH) small subunit (EC:1.4.1.14) similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 478.0
  • Bit_score: 820
  • Evalue 3.00e-235
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B53647 similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 478.0
  • Bit_score: 850
  • Evalue 7.40e-244
  • rbh

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
ATGGGCAAGGAAACCGGCTTTCTCGAGCTTGACCGTCAGGACCGCACCTATGCGGACCCGGCGGAGCGCGTGAAGCATTACAAGGAATTCGTGATCCCGCATGCCGAGCCTGCGCTCAAAGCGCAGGCCTCGCGCTGCATGAATTGCGGCATTCCCTATTGTCACAATGGCTGTCCGGTGAACAATATCATCCCGGACTGGAACCATCTGGTCTATGAAGGCGATTGGCAGAATGCGCTTGAAGTGCTGCATTCGACCAACAATTTCCCCGAGTTTACGGGGCGCATCTGCCCCGCGCCTTGCGAGGCAGCCTGCACGCTGAACATCGTGGACCAGCCGGTGACGATCAAGTCGATCGAATGCGCGATCGTCGACAAGGGCTGGGAGAACGGCTGGATCACCGCGCAGGTGGCCGCCAGGAAGACCGGCAAGTCAGTGGCCGTGGTGGGTTCGGGCCCGGCGGGTCTGGCCGCTGCGCAGCAACTGGCGCGCGCGGGCCATTCGGTCACGGTGTTTGAAAAGAACGACCGCGTGGGCGGGCTGATGCGTTACGGCATCCCCGACTTCAAAATGGAAAAGCACCTTATCAACCGCCGCATGGTGCAGATGGAAGCCGAAGGCGTGGCCTTCCGCACCTCGGTCGAGGTGGGCGTGCATGTTTCGGTCGAGTCGCTGAAGGAAAACTTCGACGCCATCGTGCTGGCAGGCGGTGCGGAAGATCCGCGTCCCCTGAACATTCCGGGCTATGAAATGCAGGGCGTGCGCTTTGCCATGGAATTCCTGACCCAGCAGAACAAGCGCGTGGCGGGCGATGATGAAATCCGCGCCGCACCGCGCGGCTCGCTGACCGCCACGGGCAAGCATGTCGTGGTGATCGGCGGCGGCGACACAGGCAGCGACTGCGTCGGTACGTCGAACCGTCAGGGTGCCCTGTCCGTCACGCAGCTGGAAATCATGCCCCAGCCGCCGGTGAAGGAAAACAAGGCTCTGAGCTGGCCGAACTGGCCGCTCAAACTGCGCACCTCGTCGAGCCACGAAGAAGGCGTGTCGCGCGAATTCGCCGTACTGACCAAGCGCGTCGTGGGCGAAAACGGGGTCGTCACCGGCCTCGAATGCGTCCGCGTCGAATGGGAAGGCGGCAAGATGGTCGAAGTGCCGGGCAGCGAATTCACGCTCAAGGCCGACCTGATCTTCCTCGCCATGGGCTTTGTCGGTCCGCGCAAGCAAGGTCTGCTCGATCAGGCTGGCGTTGAACTGGACGCGCGCGGCAATGTGAAGGCCGACACCAACAATTATCGCACCAGCGATGACAAGATCTTTGCCTGCGGCGACATGCGCCGCGGTCAGAGCCTTGTCGTCTGGGCCATCCGCGAGGGCCGTCAGGCCGCGCGCGCGGTGGACGAGGCGCTGATGGGCGTGACGGAACTGCCCCGCTGA
PROTEIN sequence
Length: 479
MGKETGFLELDRQDRTYADPAERVKHYKEFVIPHAEPALKAQASRCMNCGIPYCHNGCPVNNIIPDWNHLVYEGDWQNALEVLHSTNNFPEFTGRICPAPCEAACTLNIVDQPVTIKSIECAIVDKGWENGWITAQVAARKTGKSVAVVGSGPAGLAAAQQLARAGHSVTVFEKNDRVGGLMRYGIPDFKMEKHLINRRMVQMEAEGVAFRTSVEVGVHVSVESLKENFDAIVLAGGAEDPRPLNIPGYEMQGVRFAMEFLTQQNKRVAGDDEIRAAPRGSLTATGKHVVVIGGGDTGSDCVGTSNRQGALSVTQLEIMPQPPVKENKALSWPNWPLKLRTSSSHEEGVSREFAVLTKRVVGENGVVTGLECVRVEWEGGKMVEVPGSEFTLKADLIFLAMGFVGPRKQGLLDQAGVELDARGNVKADTNNYRTSDDKIFACGDMRRGQSLVVWAIREGRQAARAVDEALMGVTELPR*