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scnpilot_p_inoc_scaffold_4_306

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(333346..334245)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator (EC:4.2.1.1) similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 294.0
  • Bit_score: 421
  • Evalue 2.00e-115
LysR family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZC15_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 296.0
  • Bit_score: 477
  • Evalue 8.10e-132
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EGD57848.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 296.0
  • Bit_score: 477
  • Evalue 1.10e-131

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGCGGTTGATCGCAACGATCTGGCCGATCTGGCCGCCTTTCTGGTGGTGTCCGAAGAGCGCAGCTTTACCCGCGCGGCGGCCAAGCTGGGCGTGTCGCAATCGGCATTGAGCCACACGATGCGGCGGCTGGAGGCCAAGATGGGGGTGCGCCTGCTGACGCGCACCACGCGCTCGGTTTCCCCCACTGAGGCGGGCGAACGACTGGTGGCGGTGATCGGCCCCGCGCTCGATCAGATCGGCGCCGGGATCGGCGAGATCACCCAGATGCGCGAGCGGCCCGCAGGCAATATCCGCATCACCGCCTCCGAACATGCCGCAAGGAGCCTGCTCTGGCCCGCGCTGACGCGGATCCTGCCGCGCTATCCCGACATCCATGTCGAGGTCAGCATCAACAACGGCTTTGTCGATATCGTCGAGGAACGTTTCGATGCGGGCATCCGCTTGGGCGAGGCGATTGCGCGCGACATGATCGCGGTGCGCATCGGGCCTTCGCTGCGCATGGCCTGTGTCGGTTCGCCCGACTATTTCGCCCGCCATCCCATCCCCCAAACCCCGCAGGAACTGGCCCAGCACAATTGCATCAACCTGCGCATGGCCAGCAGCGGGGGCCTGTATGCCTGGGAATTTGAAAAAGAGGGCCGGGTGATGAATGTCCGCGTCGAGGGACAATTGACCTTCGGCGGGTCAAGCATGGTGCTGCAGGCCGCCGAGGCGGGCATGGGGCTGGCCATGACGGTGGATGACATCGTGCATGACAGCGTGGCATCAGGCCGTCTGGTGCGGGTGCTGGAGGACTGGTGCCCGCCCTTTGCCGGATACCACCTCTATTACCCCAGCCGCCGTCAGGCCTCACCGGCGTTTGCCTTGCTGGTCGAGGCCCTTCGGTATCGGGATTGA
PROTEIN sequence
Length: 300
MAVDRNDLADLAAFLVVSEERSFTRAAAKLGVSQSALSHTMRRLEAKMGVRLLTRTTRSVSPTEAGERLVAVIGPALDQIGAGIGEITQMRERPAGNIRITASEHAARSLLWPALTRILPRYPDIHVEVSINNGFVDIVEERFDAGIRLGEAIARDMIAVRIGPSLRMACVGSPDYFARHPIPQTPQELAQHNCINLRMASSGGLYAWEFEKEGRVMNVRVEGQLTFGGSSMVLQAAEAGMGLAMTVDDIVHDSVASGRLVRVLEDWCPPFAGYHLYYPSRRQASPAFALLVEALRYRD*