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scnpilot_p_inoc_scaffold_4_308

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(335490..336542)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase-like TIM barrel n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB72_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 350.0
  • Bit_score: 631
  • Evalue 6.70e-178
  • rbh
Xylose isomerase-like TIM barrel domain-containing protein {ECO:0000313|EMBL:KHS44059.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novos similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 350.0
  • Bit_score: 639
  • Evalue 3.50e-180
xylose isomerase-like TIM barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 350.0
  • Bit_score: 631
  • Evalue 1.90e-178

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGAAGACCATCAAAGGCCCCGGCATTTTCCTCGCGCAATTCGCGGGCGATGCTGCGCCGTTCAATTCGCTGCCCGCCATTGCCGATTACATGGCAGGGCTGGGCTACAAGGGCATCCAGATCCCGAGCTGGGACGGGCGTCTGTTCGATCTGGCCAAGGCGGCGGAAAGCCAGACCTATTGCGACGACATCAAGGGGATGCTCGCCGACAAGGGGCTGGAGATCACCGAACTTTCGACGCATTTGCAGGGTCAGCTCGTCGCGGTTCACCCCGCCTATGACGCGCAATTCGACGGTTTCGCCGCCGAGCATGTGCGCGGCAATCCCGCCGCGCGCCAGGCTTGGGCGGTCGAGCAGATGCACTTTGCCGCCAAGGCGAGCGCGCGTCTGGGCCTGACCACCCATGCCTCGTTCCCCGGCGCGCTGGCATGGCCCTATGTCTATCCCTGGCCCCAGCGCCCCGCCGGTCTGGTCGAGGATGCGTTTGACGAACTGGCCCGCCGCTGGAAGCCGATCCTTGACGTGTTCGATGAAAACGGCGTCGATATCGGCTTTGAACTGCATCCGGGCGAGGACCTGCACGATGGCGTGACCTTCGAGATGTTCCTTGAGCGCGTGAACAACCATCCGCGCGCCAACATCCTGTATGATCCGTCGCATTTCGTGCTGCAATGTCTGGACTATCTCCAGTTCATCGACATCTATCACGAGCGCATCAAGTGCTTCCACGTCAAGGATGCCGAGTTCCGCCCCTCGGGCCGCAGCGGCGTCTATGGCGGCTATCAGAGCTGGGTCAACCGTCCCGGCCGTTTCCGCAGCCTTGGCGATGGTCAGGTCGATTTCAGCCAGATCTTCAGCAAGATGGCGCAGTATGACTATGCCGGCTGGGCCGTGCTGGAATGGGAATGCGCGTTGAAGCACCCCGAAGTGGGCGCGGCCGAAGGCGCTCCCTTCATCGCCAAGCACATCATCCCGGTCACCGAACACGCCTTCGACGATTTTGCCGCAGGCGGCGAGGATCGCGATCTCAATCGGCGCCTGATGGGGCTGTAA
PROTEIN sequence
Length: 351
MKTIKGPGIFLAQFAGDAAPFNSLPAIADYMAGLGYKGIQIPSWDGRLFDLAKAAESQTYCDDIKGMLADKGLEITELSTHLQGQLVAVHPAYDAQFDGFAAEHVRGNPAARQAWAVEQMHFAAKASARLGLTTHASFPGALAWPYVYPWPQRPAGLVEDAFDELARRWKPILDVFDENGVDIGFELHPGEDLHDGVTFEMFLERVNNHPRANILYDPSHFVLQCLDYLQFIDIYHERIKCFHVKDAEFRPSGRSGVYGGYQSWVNRPGRFRSLGDGQVDFSQIFSKMAQYDYAGWAVLEWECALKHPEVGAAEGAPFIAKHIIPVTEHAFDDFAAGGEDRDLNRRLMGL*