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scnpilot_p_inoc_scaffold_4_314

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 342382..343392

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Spongiibacter tropicus RepID=UPI0003B41686 similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 335.0
  • Bit_score: 329
  • Evalue 4.00e-87
  • rbh
Scaffold7, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31858.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 336.0
  • Bit_score: 289
  • Evalue 6.50e-75
LacI family transcription regulator similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 332.0
  • Bit_score: 282
  • Evalue 2.10e-73

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
GTGGTCACCATTCGCGATATTGCCAAGCGTGCAGGCGTTTCGGTGGCCACGGTTTCGCGAACGTTGCGAGAGCCGGAGGCGGTGCGTCCGGCCAAGCGCGACGCGGTCAATCAGGCGATTGAGGAAATGAAATATGTGCCCAACGCGATTGCCCAGCAATTGCGGCGGCCACGTCATGAAGCGATCATTGTGATCGTGCCCGAAATCGCCAACCCGTTCTTTTCCGAGATTGTGCAGAGCATCGAGAATGTTGCGCATGAGCTGGGCTATCGCGTCCTGATCGGGGAAACCCAGGGTAAGCAGGAACGCCTTGATTATTATGCCGAAATGGTCACCTCACGGGTGGCGGACGGGCTGATTCTGCTCGGCTCGCTGCTGCCCTCGGTGGTGCGCGCCACGGTCAAGGCGGGCAAGCCTTTGCCCATGCCGCTGGTGCTGGCCTGCGAGAGCTATGCCGGATTGAATTGTCCGCATGTGGTGATCGACAATGTGGCTGCGGCCAAGCTGGCGGTGCAGCATCTGATCGAGGTGGGTCGCAAGAGGATCGCCACGATCACCGGGCCGATGGTCAACTCGCTGTGCGCCGACCGTCTGCGCGGCTATCATTCGGCGATGGTCGAGGCCGGGCTGACCCCGGAGGCGGGGTGGATTGTCGATGGCGATTTCACGATCGAATCGGGCCATGCCGCGATGCTGCGCCTGCTCGAACTGGAATCGCGGCCTGATGCGGTGTTTTGCGCCAATGACGAAATGGCGATCGGCGCACAGCAGGCGATTCATGAAAAAGGCCTGACTATTCCAGGTGATATTGCCATTGTCGGCTTTGATGACCTGCGCTTTGGCGCCTATGCTTCGCCGCCGCTGACAACCATCCGCCAGCCGACCAATGAACTGGGCGAAACGGCCATGCGGATGATCGACGCCATGCTGCATGACAAGCCCCTTGCAGAGCAAAGTGTTGTATTGGCGCATCAGTTGATCGTCCGCCGTTCTTCGGGGGTACAGGACTGA
PROTEIN sequence
Length: 337
VVTIRDIAKRAGVSVATVSRTLREPEAVRPAKRDAVNQAIEEMKYVPNAIAQQLRRPRHEAIIVIVPEIANPFFSEIVQSIENVAHELGYRVLIGETQGKQERLDYYAEMVTSRVADGLILLGSLLPSVVRATVKAGKPLPMPLVLACESYAGLNCPHVVIDNVAAAKLAVQHLIEVGRKRIATITGPMVNSLCADRLRGYHSAMVEAGLTPEAGWIVDGDFTIESGHAAMLRLLELESRPDAVFCANDEMAIGAQQAIHEKGLTIPGDIAIVGFDDLRFGAYASPPLTTIRQPTNELGETAMRMIDAMLHDKPLAEQSVVLAHQLIVRRSSGVQD*