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scnpilot_p_inoc_scaffold_4_328

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(361705..362427)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 231.0
  • Bit_score: 298
  • Evalue 1.50e-78
Pseudouridine synthase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L4I1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 217.0
  • Bit_score: 309
  • Evalue 4.00e-81
Pseudouridylate synthase {ECO:0000313|EMBL:GAO54023.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 217.0
  • Bit_score: 312
  • Evalue 3.90e-82

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGATCTATGGGGTGGGCATGAACATTCCCATCCTGTTTGAAGACGGCGAAGCGCTGATCGTCAACAAGCCCGCCGGCTTGCCCCTCGACCGTCCGCGCAAGGGCGGCGTGGCTCTGGAAGATTTCCTTCCCGATCTGCGCCTTGGCTTTGCGCGTGAACCGCTGCCGGTCCACCGCCTCGATCAGGACACGTCGGGCTGCCTCCTGCTGGCGCGCAATCCCAAGGCGCATAAGCGATTCTGCGCTGCCTTTGAGGCGCGCGTGGTGTCCAAGCGCTACCTTGGCGTGGTCAATGGCCCGGTGCGCAAGGAATCGGGCACGATTTCGCTCAACCTGCTCAAAACCTCGAGCAAATATGGCGGTTGGCGGATCGTCGCCTCGCACGAAGGCAAGCCCGCCGTCACCCACTGGCGCAAGATCGCCGAAGTGGACGGGATGACGCTGGTCGAATTCCGCCCCGAAACGGGCCGCACCCACCAGATCCGCGTCCATGCGCAAAAGGGCCTCGGCGCGGCGCTGGTGGGCGATCCGATCTATGGCGACGGCACGGGCGCGGCGCGCACGATGCTTCACGCGGTCGAGCTGACCGTCCTGCGCGAGGGCAAGCCGCCGATCCATGCCGTGGCGCCTCTCCCTGAGGATTTCATCGAATTGGGATTTGAGGAAGGGATGGATTTGGCGAAGGTTTGGGAACAGCAGGGCGAGGAAGATCAGGGGGAGTGA
PROTEIN sequence
Length: 241
MIYGVGMNIPILFEDGEALIVNKPAGLPLDRPRKGGVALEDFLPDLRLGFAREPLPVHRLDQDTSGCLLLARNPKAHKRFCAAFEARVVSKRYLGVVNGPVRKESGTISLNLLKTSSKYGGWRIVASHEGKPAVTHWRKIAEVDGMTLVEFRPETGRTHQIRVHAQKGLGAALVGDPIYGDGTGAARTMLHAVELTVLREGKPPIHAVAPLPEDFIELGFEEGMDLAKVWEQQGEEDQGE*