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scnpilot_p_inoc_scaffold_4_334

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(370704..371453)

Top 3 Functional Annotations

Value Algorithm Source
Calcium-binding EF-hand protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB85_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 255.0
  • Bit_score: 147
  • Evalue 1.60e-32
Scaffold14, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31066.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 241.0
  • Bit_score: 159
  • Evalue 7.50e-36
calcium-binding EF-hand protein similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 255.0
  • Bit_score: 147
  • Evalue 4.50e-33

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAGGAAACTTTCTATCGGGCTTTCCGCCATTGCCCTCATGGCGGTTTCGGCTGCCCATGCGCAGGCGCCCGCCACGCCCCCGGCGCCGCCTGCCGGCCCCCACGCCATGGGCCATGGCATGCCCCCCCGCGCCATGCCCCCGATGAAGGACATGACCCGCGCCGAAGCCAAGGCCCATGCCGAAAAGATGTTCGACATGATGGACATCAATCATGACGGCAAGCTGGACAAGGCCGACCGCGAGGCGCGCGAGGCCAAGCATTTCGACGCCATGGACACCAACCATGACGGCCAGTTGAGCCGCCAGGAATTTGAAGCCGCCCATGACAGGATGCGCGAACGGATGAAGCATGGCATGGGCGCCATGGGTGCCGATCATGACATGCCCCCGCCGCCTCCGGGCGGACCGGACGGCAAAATGGATCACGGCAACATGGGGCCGGGCGGCCCCGGCATGAAAGGTCCGCGCGGACATCATCGCATGGGCCGCGGCATGATGATGATGGGCCTGATGCGCCAGGCCGATCCCAATCACACCGGCACCGTGGCCAAGGACGCCTTTGTCGGCGCCGCGCTCAAGATGTTTGACAGCGCGGATGCCAATCACGATGGCAAGGTCACGCCCGAGGAACGTCGCGCCGCAATGAAGGCCCATATGGGCCAGAACATGGGCGGGCGCGGTCCGGGTGGCCATCGCCCTGAACATGGCGGCCATGACATGCCGCCCCCGCCTCCTGCGGGGCAGTAA
PROTEIN sequence
Length: 250
MRKLSIGLSAIALMAVSAAHAQAPATPPAPPAGPHAMGHGMPPRAMPPMKDMTRAEAKAHAEKMFDMMDINHDGKLDKADREAREAKHFDAMDTNHDGQLSRQEFEAAHDRMRERMKHGMGAMGADHDMPPPPPGGPDGKMDHGNMGPGGPGMKGPRGHHRMGRGMMMMGLMRQADPNHTGTVAKDAFVGAALKMFDSADANHDGKVTPEERRAAMKAHMGQNMGGRGPGGHRPEHGGHDMPPPPPAGQ*