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scnpilot_p_inoc_scaffold_4_413

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(468046..469062)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002880C44 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 251.0
  • Bit_score: 195
  • Evalue 9.10e-47
VacJ lipoprotein {ECO:0000313|EMBL:GAO55500.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 340.0
  • Bit_score: 196
  • Evalue 4.40e-47
VacJ-like lipoprotein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 352.0
  • Bit_score: 173
  • Evalue 1.00e-40

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGCGCTGCCCCTCGTCCTGCCGCTGGCGCTGGCGCCTCTCGCCGCAGCCGCCAGCACGCCCGATCCAGCCACCTCGCCCGAGGACGCCGAAGCCGCTGCCCAGGTGGCCGCCATCGCCGCAGAACATCCCGATGACCCGGCCCATCCCGACGACAATGCCCCCATCATCGTGATCGGCATGGCGCAGGCCGCCCAGCGCGACGGCAAGAGTTTCGAGGAACCCGAGGAAGGCCCCGACACGATCGCCAACCTCGCCAATCCCGACCCGCTCGAAGGCATGAACCGCGTGTTCTTTGCCATCACCCAGCCGATCGACCGCTTTATCCTGCGCCCCATTGCCATCGTCTATCGCACCGTCCTGCCCGAACCGGTGCGCGACGGGGTGCATAATGCGCTGGCCAATATCTTCATGCCCTCGACGCTGGCCAATGACATGATCCAGTTGAAACCCGAACGCGCGTGGCAGACCGCCAAACGCTTCGTGCTCAATTCGACGCTGGGCTTTGGCGGTCTGGTCGATGTGGCCAAACGCAAGCCCTTCAACACGCCCGCGCACAGCAACGGCTTTTCCAATACGCTGGGCGTGGCCGGGGCCGGGCCGGGGGTTTACCTCTATCTGCCCCTCCTTGGGCCGACAACGATCCGGGACCTGATCGGCATGGGCGGCGATGCCTTTACCCAGCCGCTGCTGCTGGACCGCGTGTCGCGCCCGCAGGTTTCGGTGGCCCCCAACCGCCGCCCGCGCTCCTTCGTGACCGAGGCGGTTTCGGTCTCCACCCCCGGCGCCATCGCGCTGGGCACCAGCGGCGTCGATACGCGCGCCCGCGCCGAGCCCGAGCTCAAGGCGCTCAAGGCCCAGTCGGTCGACTTCTACGCTGCCCTGCGCTCCACCTATCTGCAGCACCGCGCCGGGCAGATCGCCGCGCTCAAAGTCCCGCCGGGGCAAGCGCCCGAAGTGCCCGAATTCGATGATCCGCTGGAGGATCCGGGGGCGAAACCGGCGGCGAAGCCTTAA
PROTEIN sequence
Length: 339
MALPLVLPLALAPLAAAASTPDPATSPEDAEAAAQVAAIAAEHPDDPAHPDDNAPIIVIGMAQAAQRDGKSFEEPEEGPDTIANLANPDPLEGMNRVFFAITQPIDRFILRPIAIVYRTVLPEPVRDGVHNALANIFMPSTLANDMIQLKPERAWQTAKRFVLNSTLGFGGLVDVAKRKPFNTPAHSNGFSNTLGVAGAGPGVYLYLPLLGPTTIRDLIGMGGDAFTQPLLLDRVSRPQVSVAPNRRPRSFVTEAVSVSTPGAIALGTSGVDTRARAEPELKALKAQSVDFYAALRSTYLQHRAGQIAALKVPPGQAPEVPEFDDPLEDPGAKPAAKP*