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scnpilot_p_inoc_scaffold_4_575

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(649698..649946)

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane region and signal peptide prediction n=1 Tax=Sphingomonas sp. LH128 RepID=J8VF74_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 84.0
  • Bit_score: 93
  • Evalue 1.20e-16
Transmembrane region and signal peptide prediction {ECO:0000313|EMBL:EJU11432.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 84.0
  • Bit_score: 93
  • Evalue 1.70e-16
signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 80.0
  • Bit_score: 87
  • Evalue 1.40e-15

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGTTCCGCCTGATCGCCGCGCTGTTTTCCGGGCTTGTTGTCGGGCTGGTGGCCCGCTTTGTCTATCTGGGCACGGTGCCGATGGGGTGGTGGATGACGATTCTGCTGGGCATCGGGGGATCGTTGCTGGCCGATCTGGTGGTCAATCGCGGCGATGTGGGGCGCCCGGCCCGCCCGGCCGGATTCATCGCCTCGGTGGTGGGGGCGATGGCGCTGATTTTCATCGGGCGACATATGGGCTGGCATTGA
PROTEIN sequence
Length: 83
MFRLIAALFSGLVVGLVARFVYLGTVPMGWWMTILLGIGGSLLADLVVNRGDVGRPARPAGFIASVVGAMALIFIGRHMGWH*