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scnpilot_p_inoc_scaffold_4_608

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 687735..688187

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q038_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 142.0
  • Bit_score: 147
  • Evalue 1.30e-32
Transcriptional regulator {ECO:0000313|EMBL:EJL33477.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 142.0
  • Bit_score: 147
  • Evalue 1.80e-32
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 135.0
  • Bit_score: 109
  • Evalue 6.30e-22

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGCATCATGATTCCCTCGCCAGCGCCCCCTGCGCCTGCACCAGCCTGCGCAAGGCGACCCGTACGCTCGACCGGCTTTATGACGCGGCGCTGGCGCCCCATGGCATCACCACCACGCAATTCGCGCTGATGCGCAATATCGAGCGGGCGGGGGCCATCGTCCTCAATCAACTGGCCACGCTTTTGGTGATGGACCGCACCTCGCTCTATCGCACCATCCGCGCGATCGAGGAGGCGGGATGGGTGAGCATCACCGATGGTCCGGGCAAGGCGCGGCTGGCGCAGATCACCGATGCGGGCCGGGCCATGCTGCGCGCCGCCGAGCCGGACTGGGAGGATTTGCAGGCCCGGATCCATGGCCGTTTGGGCGAGGACGGCTGGGCGCGGCTGATGGAGATGAGCGGGGCAATCATTGCGCTTGGCCAGACCGCAGGCCGGGAGGCGCGGGCATGA
PROTEIN sequence
Length: 151
MHHDSLASAPCACTSLRKATRTLDRLYDAALAPHGITTTQFALMRNIERAGAIVLNQLATLLVMDRTSLYRTIRAIEEAGWVSITDGPGKARLAQITDAGRAMLRAAEPDWEDLQARIHGRLGEDGWARLMEMSGAIIALGQTAGREARA*