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scnpilot_p_inoc_scaffold_4_611

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 691362..692276

Top 3 Functional Annotations

Value Algorithm Source
Two component LuxR family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8K7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 304.0
  • Bit_score: 396
  • Evalue 2.40e-107
  • rbh
Two-component response regulator {ECO:0000313|EMBL:GAO53878.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 302.0
  • Bit_score: 399
  • Evalue 3.10e-108
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 296.0
  • Bit_score: 361
  • Evalue 1.90e-97

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGTCGCTGCCTGTTCATACGCAGACCGTGCTGGTCGTCGATGACGAACCGGATTCGCTGCGCATGCTCACCGCCGCGTTGGAAGGCGCGGAATTGAGCGTTCTGGTGGCAACCTCGGGGCAGGCTGCGCTTGATCTGTTGGGCCATATCCTTCCCGATCTGATCCTGATGGATGCGGTGATGCCCGGCATCGACGGGTTTGAAACCACCGCGCGGATCAAGGCGCGGCCCGAACTGGCCAATGTGCCGGTGATCTTCATGACCGGCCTGACCGAGAGCGAGCATGTGGTCGAGGCCTTCGAGGTGGGCGGCACCGATTATGTGCGCAAGCCGGTCAATCTGATGGAACTGATCGCGCGGGTGCGGGTGCATATGGCGCAAAGCCGCGCGATGCATGCCAGCGTGGCCAGCCTTGATGCCACCGGCCGCCTGATGATGGCCACCGATGCGCAGGGGCGGATGCTGTGGTGCACTCCGCGCGCCGAACAGGCGATCGCGCGGCTGGTGCCCGAGTGGAGCCGCGAAGGCGGGTTGCCGCCTGCGGTGTCGGTGCTGGTCGAGCGCCTTTTGCAGCGCGGGGGCAAGCCGGGGTCGGCGGTGAAGGGTGAATTTGGCGAGAGTTCGCTCGAATTGCTGGTCATCGCCCATTACCGCGAGAATGAGGTGCTGATCCGCCTCAATGAAATCAGCCACGAACAGAACGTCGCCAAATTGCGCGACAGTCTGGACCTGACCCAGCGCGAGGCCGAGGTGCTGCTGTGGGTGGGCTATGGCAAGGCCAGCAATGATATTTCCGACGTGCTGGATATCAGCCCGCGCACCGTTCAGAAGCATCTGGAGCGGATTTATGTGAAGCTGGGCGTCGAGAAGCGTTCGGCTGCTGCCGCCATCGCGATCAGGATTATCGAGCAGTAA
PROTEIN sequence
Length: 305
MSLPVHTQTVLVVDDEPDSLRMLTAALEGAELSVLVATSGQAALDLLGHILPDLILMDAVMPGIDGFETTARIKARPELANVPVIFMTGLTESEHVVEAFEVGGTDYVRKPVNLMELIARVRVHMAQSRAMHASVASLDATGRLMMATDAQGRMLWCTPRAEQAIARLVPEWSREGGLPPAVSVLVERLLQRGGKPGSAVKGEFGESSLELLVIAHYRENEVLIRLNEISHEQNVAKLRDSLDLTQREAEVLLWVGYGKASNDISDVLDISPRTVQKHLERIYVKLGVEKRSAAAAIAIRIIEQ*