ggKbase home page

scnpilot_p_inoc_scaffold_4_668

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 745865..746638

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor for flagellar operon FliA n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IIS6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 258.0
  • Bit_score: 350
  • Evalue 1.70e-93
  • rbh
RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 258.0
  • Bit_score: 350
  • Evalue 4.70e-94
  • rbh
RNA polymerase sigma factor for flagellar operon FliA {ECO:0000313|EMBL:CCA94144.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 258.0
  • Bit_score: 350
  • Evalue 2.40e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAACATGATCCCCAGTCTTTCGCAAAACCCCGGCCGGCAGGCAATGCGGCGCGCGCCTATGGCGGCGCGGCTAGGGCCTATGGCGGCGATATTGCCGACCGTGTCCGCCGCTTTATGCCGATGGTGCGGCGCCTTGCCTGGCATCTCCAGTCCTCGGGCCGCGATGGCATAGAGGTCGAGGATCTGATGCAGGCGGGCCTTGTCGCCCTGACCGAATGCGCCCAGCGCCATCAGGGGCCGACCGAGGACGGCTTTGCCGCCTATGCCAAGATGCGGGTGAGGGGGGCGATGGTCGATCTGATCCGCCGCCATGTCCCCCTGTCGCGCGGGGCGGTCGAGCGGCGGCGGCTTATGCGCGAAAAGACGCAGGAATTGACCGGGAAACTGGGGCGCGAACCCTATGATGTGGAATTGTCCGGCGCGCTGGGCATCACTCTGGGCGAGCTTGAGGCCTTGCGCAATTCCTCAGAACCGCTGCGTTTCGAGGCTATCGACGATGCCTATTCCGACAGCAACATGGCCTTTGCCGACGATGCGCCTGATAGCCTCGCGCTGCTGGCCGACGAGGAATTGCGCCAGAGCGTGGCAGGCGCCATCGCCGAGCTGCCCGAGAGGCTTCAGATGGTGATCCAGCTCTATTTCGTTGAGGAGCTCAACCTTGCCGAAATTGCCGAGGTGCTCTCGGTGTCCATCCCGCGCGTGCATCAGTTGAAGGCGCAGGCGATCGAGAAATTGCGCCATGCGTTGCAGGGTGTGGCGGATATTTTGTAG
PROTEIN sequence
Length: 258
MKHDPQSFAKPRPAGNAARAYGGAARAYGGDIADRVRRFMPMVRRLAWHLQSSGRDGIEVEDLMQAGLVALTECAQRHQGPTEDGFAAYAKMRVRGAMVDLIRRHVPLSRGAVERRRLMREKTQELTGKLGREPYDVELSGALGITLGELEALRNSSEPLRFEAIDDAYSDSNMAFADDAPDSLALLADEELRQSVAGAIAELPERLQMVIQLYFVEELNLAEIAEVLSVSIPRVHQLKAQAIEKLRHALQGVADIL*