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scnpilot_p_inoc_scaffold_4_713

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 796126..797007

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 285.0
  • Bit_score: 271
  • Evalue 3.20e-70
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:CCA92154.1}; EC=1.1.1.25 {ECO:0000313|EMBL:CCA92154.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 285.0
  • Bit_score: 271
  • Evalue 1.60e-69
Shikimate 5-dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL52_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 285.0
  • Bit_score: 271
  • Evalue 1.10e-69

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGACCCATGCTTCCTCTCCGGTTTCCTCCCATGCTGTCGGCCTGATCGGGCGGGGCATCGGCGCCAGCCGCTCACCCGCGATCCATGAGGGCGAGGCGCGGGCGCTGGGTTTGCCGCTGACCTATCGCCTGTTCGATTTCGACGCGATGCATTGGGGCGATGAGGAACTGGGGCGGGCGGTGCGCCTGATGCGCGATGTCGGCTATTCGGGCAGCAATGTGACCTTTCCCTTCAAGCAGCAGGTGATCGCCCATTGCGATGAATTGAGCGATGAGGCCAAAGTGCTGGGCGCGGTCAACACACTGGTGTTTCGCGATGGGCGGGTGCGCGGCGAGAACACCGACTGGATCGGGTTCTCATGGCTGGTCGAACGCGCTTTCGGCTCGATTGCCGGAGCCCGCGTCGCCCAGATCGGCACCGGCGGCGCGGGCAGCGCGACGGCTCTGGCGCTGGCTCAACTGGGCGCGGTCGAGGTGGTGCTGTTCGACCCCGAGGCGGCGCGGGCCGCGCGGCTGGCCGACAGCCTTTCGCAGGCGGTTCCGGCCTGCCGCTTTACCGTGGCCCGGGATGTGGGCGCGGCGATTGCCCTTTGTGCAGGCGTGGTCAATGCAACGCCCGTCGGCATGGCCAAATTGCCGGGCATGCCGTTTGATCCGGCCCTGATGCGCGCCGATCAATGGCTGGCCGACATCATCTATTTCCCCTTGGAAACAGAGCTGTTGGCCGCCGCCCGTGCGCAGGGGCAAAGGGTGGCCAATGGTGTGTCCATGGTGGTAGGACAGGCGGCCGAAGCCTTTCGCCACATCACCGGCATCGCTCCTGACCGGGAGCGTATGCTGGCGCGTCTGTTGGCGGATATTGCAGGAGAACAGGCTGCATGA
PROTEIN sequence
Length: 294
MTHASSPVSSHAVGLIGRGIGASRSPAIHEGEARALGLPLTYRLFDFDAMHWGDEELGRAVRLMRDVGYSGSNVTFPFKQQVIAHCDELSDEAKVLGAVNTLVFRDGRVRGENTDWIGFSWLVERAFGSIAGARVAQIGTGGAGSATALALAQLGAVEVVLFDPEAARAARLADSLSQAVPACRFTVARDVGAAIALCAGVVNATPVGMAKLPGMPFDPALMRADQWLADIIYFPLETELLAAARAQGQRVANGVSMVVGQAAEAFRHITGIAPDRERMLARLLADIAGEQAA*