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scnpilot_p_inoc_scaffold_4_766

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(853833..854741)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G901_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 302.0
  • Bit_score: 404
  • Evalue 1.20e-109
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHS42629.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 302.0
  • Bit_score: 405
  • Evalue 7.30e-110
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 302.0
  • Bit_score: 404
  • Evalue 3.30e-110

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCGCTTCAAACAGCTCGACCTGAACCTGCTGGTGGTTTTCTCCGCCCTGATGGAAACGCGCAGCGTCACCCGTACCGCCGAACGCCTCGGCCTCACGCAACCGGCCGCCAGCGCCTCGCTGCGCCGGTTGCGCGCCTATTTCGGTGATGAACTGCTGGTGCAGGTGGGCAAGCGGATGCACCCTACGCCCTTTGCCGAGTCCCTGTACCCCCAGATCCAGCGCAGCCTGCAAAGCGTCGAACAGGCCATCGCCACCCCCGCCGGTTTCGATCCGGCCACCTCCACGCGACGGTTCCGCATCAATGCTTCGGATTATGTGATGGTCGCGGTGCTGGTCGCTCTGGCGCAGCGCGTGGCCGCCGCCGCACCGCAGATCCAGTTGGAGGTGATGCAGCCCACCGAGCGCAATGCCGACGATCTGGAGGGCGGCAAGATTGATCTGCTGATCGCACCCGAACAATTGCTGGCGCCCTGGCATCCTTCTGAATTCCTTTATGAAGAAGAGCAGGTCGTGGTCGGCTGGGCGGGCAATCCGATCTTTGCCTCGGGGCTGAGCGCAGATGAATTCTTTGCCGCCGGCCATGTCGGCGTGGCGCTGGGCACGCGCCGCGCGGCCACCTTTGCCGACACGCAACTCGCCCGCATGGGGCGACAGCGGCGGATCGACATTGAGGTCGCCTCCTTTGCCAGCGTGCCGTGGTTTCTGCAAAACACGATGCGGCTTGCCGTCTTGCACAAACGTCTTGTGCGCGCGATGATGCCGCAATTCGATCTGGCCTTTGCGCCCATGCCCTTCCCCTTCCCCCGCCTGCGCGAAATGGCGCAGTTTCACGAGGCGCGGCGTGATGATGCGGGGCTGGTCTGGCTGCGAGAGCAATTGCGATTGGCGGCCCAGACTACATCATAA
PROTEIN sequence
Length: 303
MRFKQLDLNLLVVFSALMETRSVTRTAERLGLTQPAASASLRRLRAYFGDELLVQVGKRMHPTPFAESLYPQIQRSLQSVEQAIATPAGFDPATSTRRFRINASDYVMVAVLVALAQRVAAAAPQIQLEVMQPTERNADDLEGGKIDLLIAPEQLLAPWHPSEFLYEEEQVVVGWAGNPIFASGLSADEFFAAGHVGVALGTRRAATFADTQLARMGRQRRIDIEVASFASVPWFLQNTMRLAVLHKRLVRAMMPQFDLAFAPMPFPFPRLREMAQFHEARRDDAGLVWLREQLRLAAQTTS*