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scnpilot_p_inoc_scaffold_23_5

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(16865..17947)

Top 3 Functional Annotations

Value Algorithm Source
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 352.0
  • Bit_score: 463
  • Evalue 2.10e-127
arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89) similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 346.0
  • Bit_score: 423
  • Evalue 4.70e-116
arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B335B8 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 357.0
  • Bit_score: 540
  • Evalue 1.20e-150
  • rbh

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGGCCCTTGGACTTCTTGCCGCCGCGCTGCTGGCTTCGGCCTCGACACCGGCCGCGCCCAAACTCTATCTGGGCGCCGATCTGTCCTTTACCAATGAAATGGAGGATTGCGGCGCGGTCTTTCGCGAGGGCGGCAAGCCCGTCGATCCCTTTGCGCTGATGAAGGCGCATGGCGGCAACATCATGCGCGTGCGCATCTGGAACGCGCCGGGCTGGACTAGATACAGCACCTATGAGGATGTGCTCAAGACGATCCGCCGCGCCCATGCGGCGGGCCTGGAGGTGCTGCTCGATTTCCATTATTCCGACGACTGGGCCGATGGTGAAAAGCAGATCGCGCCCGCCGCATGGGCCAAACTTTCCACCGACGATCAGGTCAAGGCGCTGCATGATTACACGCGCCAAATCCTCGACCGTCTGGCCGCCGAGGGGCAATTGCCCGCCTTTGTTCAGGTGGGCAATGAAACAAACCCGGAAATGCTGGGCGGCACCAAGGATGGCCGGATCAACTGGGAGCGCAATGCGCGATTGATCAACGCAGGCGTTGCCGCCGTGCGCGAGGCGGCCAAGGCCCATGCCCATCCGATGAAAGTCATGCTGCATATCGCCCAGCCGGAAAATGTCATCGGCTGGTTCGACGATGCGACGGCGGCAGGCGTGATGGATTATGACATCATCGGCATCAGCTATTATTCCAAATGGTCGAAATACAACCTCACGGGCCTGGGCAAGGTGATCGATGCCGCCCACAAGCGCTATGACGCGGATGTCTGGGTGGTGGAAACGGCCTATCCCTTTACCAATGACTATGGCGACACCACGCCCAACCTGCTGGGTTCGGATTCGGCCCTGCCCGAATATCCCGTCACCCGCGAGGGGCAGGCCCGCTATATGGAGGACCTGACGAAACTGGTGGTGGCCAATGGCGGCAATGGCGTGGTCTATTGGGCGCCCGACCGGGTTTCGACCGGATGCAGGACGCGCTGGGGCGTGGGATCGGATTGGGAAAATGCCGCGTGGTTCGACATCAAGCGGCATGAGGCGCTGCCCGTTATGCGCTTTATGGAAATGACGCGGAAATAA
PROTEIN sequence
Length: 361
MALGLLAAALLASASTPAAPKLYLGADLSFTNEMEDCGAVFREGGKPVDPFALMKAHGGNIMRVRIWNAPGWTRYSTYEDVLKTIRRAHAAGLEVLLDFHYSDDWADGEKQIAPAAWAKLSTDDQVKALHDYTRQILDRLAAEGQLPAFVQVGNETNPEMLGGTKDGRINWERNARLINAGVAAVREAAKAHAHPMKVMLHIAQPENVIGWFDDATAAGVMDYDIIGISYYSKWSKYNLTGLGKVIDAAHKRYDADVWVVETAYPFTNDYGDTTPNLLGSDSALPEYPVTREGQARYMEDLTKLVVANGGNGVVYWAPDRVSTGCRTRWGVGSDWENAAWFDIKRHEALPVMRFMEMTRK*