ggKbase home page

scnpilot_p_inoc_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 363 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_23_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2990)
DNA (2988bp) protein (996aa)
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZD3_AZOBR
putative hemagglutinin/hemolysin-related protein
Putative hemagglutinin/hemolysin-related protein {ECO:0000313|EMBL:CCD03292.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.
scnpilot_p_inoc_scaffold_23_2
unknown

Not on your lists

3082..3966
DNA (885bp) protein (295aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_23_3
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4440..13742
DNA (9303bp) protein (3101aa)
Outer membrane autotransporter barrel domain protein n=2 Tax=Burkholderia multivorans RepID=B9BHY7_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:KHL26565.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
serine protease/outer membrane autotransporter
scnpilot_p_inoc_scaffold_23_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14160..16748
DNA (2589bp) protein (863aa)
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B39031 rbh
TonB-dependent receptor {ECO:0000313|EMBL:EJL23596.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
TonB-dependent receptor
scnpilot_p_inoc_scaffold_23_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16865..17947)
DNA (1083bp) protein (361aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo
arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B335B8 rbh
scnpilot_p_inoc_scaffold_23_6
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17961..20456)
DNA (2496bp) protein (832aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000368A4A8 rbh
Scaffold13, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31168.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
glycosyl hydrolase family protein
scnpilot_p_inoc_scaffold_23_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20461..21384)
DNA (924bp) protein (308aa)
galactose 1-dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288C79D rbh
galactose 1-dehydrogenase
Galactose 1-dehydrogenase {ECO:0000313|EMBL:AJP73763.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
scnpilot_p_inoc_scaffold_23_8
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21512..23305
DNA (1794bp) protein (598aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3C123 rbh
Dihydroxyacid dehydratase/phosphogluconate dehydratase {ECO:0000313|EMBL:EJL32628.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosph
scnpilot_p_inoc_scaffold_23_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23316..24173
DNA (858bp) protein (286aa)
L-arabinonolactonase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B60925 rbh
SMP-30/gluconolaconase/LRE domain-containing protein
SMP-30/gluconolaconase/LRE domain-containing protein {ECO:0000313|EMBL:AGH49662.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomon
scnpilot_p_inoc_scaffold_23_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24183..24902)
DNA (720bp) protein (240aa)
GntR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI000263076A rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KGB53155.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_23_11
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24989..26566
DNA (1578bp) protein (526aa)
sodium transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6C4C1 rbh
Sodium/glucose cotransport protein {ECO:0000313|EMBL:KGB53154.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sph
sglT; Sodium/glucose cotransporter
scnpilot_p_inoc_scaffold_23_12
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26568..27437
DNA (870bp) protein (290aa)
2-oxo-3-deoxygalactonate kinase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002889DC9 rbh
2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:KGB53153.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin
2-dehydro-3-deoxygalactonokinase
scnpilot_p_inoc_scaffold_23_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27437..28066
DNA (630bp) protein (210aa)
2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC:4.1.2.21)
2-dehydro-3-deoxy-6-phosphogalactonate aldolase {ECO:0000313|EMBL:AIT06308.1}; EC=4.1.2.21 {ECO:0000313|EMBL:AIT06308.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingo
2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4BEF6
scnpilot_p_inoc_scaffold_23_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28151..28891
DNA (741bp) protein (247aa)
methyltransferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B35EA9 rbh
Putative membrane protein {ECO:0000313|EMBL:EJL28793.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sour
Mg2+ transporter-C family protein
scnpilot_p_inoc_scaffold_23_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28929..29975
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UF21_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN88773.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
scnpilot_p_inoc_scaffold_23_16
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30099..30701
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7T0_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26093.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_23_17
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30706..31854)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GY06_9SPHN rbh
hypothetical protein; K09992 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
secreted glycosyl hydrolase
scnpilot_p_inoc_scaffold_23_18
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

32099..32812
DNA (714bp) protein (238aa)
family 2 glycosyl transferase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBEE rbh
glycosyltransferase Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
glycosyltransferase
scnpilot_p_inoc_scaffold_23_19
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32834..33088
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCH9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57739.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_23_20
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33150..34019
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HZK8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB17498.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_23_21
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34149..35363
DNA (1215bp) protein (405aa)
Major facilitator transporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IHA0_9SPHN rbh
major facilitator superfamily transporter
Major facilitator transporter {ECO:0000313|EMBL:CCA91351.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_p_inoc_scaffold_23_22
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35464..36321
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00035E0CCB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO89665.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter l
hypothetical protein
scnpilot_p_inoc_scaffold_23_23
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36315..37553)
DNA (1239bp) protein (413aa)
UPI0003D0126D related cluster n=1 Tax=unknown RepID=UPI0003D0126D rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EZP80547.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
MFS transporter
scnpilot_p_inoc_scaffold_23_24
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37717..38532
DNA (816bp) protein (272aa)
Alpha/beta hydrolase fold protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8S8N5_9SPHN rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EJU09239.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_23_25
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38529..39188
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2HEH3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL33983.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_23_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39297..40682
DNA (1386bp) protein (462aa)
Putative sugar transporter n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WJP4_9SPHN rbh
Sugar (Glycoside-pentoside-hexuronide) transporter {ECO:0000313|EMBL:KHS45022.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobi
Na+/melibiose symporter-like protein
scnpilot_p_inoc_scaffold_23_27
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40854..42992
DNA (2139bp) protein (713aa)
TonB-dependent siderophore receptor n=1 Tax=Novosphingobium sp. AP12 RepID=J2GRY6_9SPHN rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJL33125.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosph
TonB-dependent receptor
scnpilot_p_inoc_scaffold_23_28
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43048..43434
DNA (387bp) protein (129aa)
Cytochrome c, class I n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CAS2_9SPHN
Cytochrome c, class I {ECO:0000313|EMBL:EIZ80535.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobiu
cytochrome c, class I
scnpilot_p_inoc_scaffold_23_29
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43443..44351
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L7U6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EIZ80534.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_23_30
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44434..44796)
DNA (363bp) protein (121aa)
UPI0003D03FA9 related cluster n=1 Tax=unknown RepID=UPI0003D03FA9
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34476.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
Displaying items 1-30 of 363 in total

View Taxonomy