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scnpilot_p_inoc_scaffold_23_10

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(24183..24902)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI000263076A similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 235.0
  • Bit_score: 334
  • Evalue 8.90e-89
  • rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KGB53155.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 230.0
  • Bit_score: 318
  • Evalue 7.10e-84
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 224.0
  • Bit_score: 314
  • Evalue 2.70e-83

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGACCGACAATGACGATATCTCCGGCCTTGGGCGCAATCTGACCTACGGGCTGCTCGATCTGCTGGGGCGGCAAATCGTGACGGGCGCCTTTGAAAACCGCCCCTTTCCCACCGAGGCCGAGCTTTCGACCCAGCACGGCGTCAGCCGATCGGTCACGCGTGAGGCGGTCAAAATGCTGACGGCCAAGGGGTTGCTGACCGCAAGGCCAAGACAGGGCACCAGCATTCAGCCGGTGGCGAGCTGGAACCTGTTTGACGCCGATGTGCTGCGCTGGCTGCTCGAACGCAAATTCTCGGTCGAGCTGCTCTCGCAGTTCAACCAGTTGCGCGCGGCCATCGAACCGGCCGCCGCCGCGCTGGCCGCCGGCTCGGCCGATGACAAGGGGCGCGCGCTGATCGAGGCCGGGTTTGCGCGGATGGAGGCCGCCGAAATGGGCGAGGACGATGTACTCGACGCCGACATCGCGTTCCATCTGGCCATCCTGCGTGCCAGCGGCAATCCCTTCTTCGCCCAGTTCCGCGATGTGGTCGCCACGGCCCTGCGCACCTCGATCCGGCTGACCAACCGCATTGTCGGGCGCACGGCCGATCTGGCCGCGCATGGCGCGGTGCGCGATGCGATCATGGCCCGCGATCCGCGCGCGGCCCAGGACGCCATGCGCGCGATCATCGGCGATGTCATGGACCTGATCGCCCGGCACAGCCATGCGGCGCATTAG
PROTEIN sequence
Length: 240
MTDNDDISGLGRNLTYGLLDLLGRQIVTGAFENRPFPTEAELSTQHGVSRSVTREAVKMLTAKGLLTARPRQGTSIQPVASWNLFDADVLRWLLERKFSVELLSQFNQLRAAIEPAAAALAAGSADDKGRALIEAGFARMEAAEMGEDDVLDADIAFHLAILRASGNPFFAQFRDVVATALRTSIRLTNRIVGRTADLAAHGAVRDAIMARDPRAAQDAMRAIIGDVMDLIARHSHAAH*