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scnpilot_p_inoc_scaffold_23_23

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(36315..37553)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D0126D related cluster n=1 Tax=unknown RepID=UPI0003D0126D similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 402.0
  • Bit_score: 445
  • Evalue 6.20e-122
  • rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EZP80547.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 402.0
  • Bit_score: 449
  • Evalue 6.00e-123
MFS transporter similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 411.0
  • Bit_score: 325
  • Evalue 2.60e-86

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Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGAGCGATATGCCCCAACACCCCCTTACCGCCCGCGAGGAATTCTCGCGCGGGTGGGGCGTCATTCTGGCCTCCACGCTGGGCATAGGTCTGGGCATGGCGGCGGTGCCGACCTATTCGATGGGCCTGTTCGCGCCCTATCTGGTGCGCGAATTCGGATGGTCGGTGGGCCAGATCATGGCCTCGATGTCGATCATCACGCTGATGTCGCTGTGGGCAGGGCCGTCCTATGGCGCATGGGCCGAAAGGATCGGGGCGCGGCGAATCATCCTGGTGGCGATCCCCTTGTGGGGGTTGGGCTTTGTCTCGCTCTCGCTGCTCACCGGGTCATTGGTGCAATTCTATCTGACATGGCTGGCCATCGGCCTTGTGGGCGCGGCCACTTTGCCGATCACCTTTACCCGCGCGGTCAATCGCGGGTTTGACCGGGCCAAGGGGCTGGCGCTGGGGCTGGCCATGACGGGCACCGGCTTGTTCGGCATTTTCGGCAAGCCCTTTCTGGGCGCGGTGCTGGCGGCCTATGGCTGGCGGATGGGTTTTGTGGCGGTGGGGCTGCTGCCTGTGCTGATCGCCTTTCCCGCCGCCTTTTTCCTCTTTCGCGAGGAGGAGCGCAGCACCCCCGACGGCCATCACGCCCCGGTCGAACGCCCCGGCATGACCACGCCCGAGGCGCTGCGCGACTGGCGCTTCTGGCTGATTGCGGCGGCGCTGGTTCCCACCTCGTTTGCCATGGGCGGGCCTGTGCCCAATCTGGAACTGATCCTGAAAGACGGCGGCCTCTCGCCCGAACAGGCGCTGACCGTGACCCCGCTGATCGGGCTGGCGGCCATCATCGGGCGGCTGGTGGGGGGCTGGCTGCTGGATCGCATCTGGGCGCCGCTGGTGGGCTTTGTCATCCTCTCGCTGCCCGCGTTCAGCCTTTGGTATCTGGGCAGCGGGCTGCTCGATGTCGGCCATGCGCGCCTTGCCACCTTCACGCTGGGTTTCGCGCTGGGGATCGAATACGATATGGTGGCCTTCTTTGTGGCGCGCTATTTCGGGCTGCGGCGCTATGGCGCGATCTATGGGCTGCTCTATGTCTGCTTTGCGGCCGGGGCCGGGTTCTCGCCGATGGTGTTTGGCCATAACCATGACACCACCGGCAATTTCCATGCGATCCTTTCGGCTTCTTCCGTGGCGCTGGTGATTTGCGCCGCCAGCTTTCTGCTGCTGGGCAAATATCGCCGGTTCGATCAATAA
PROTEIN sequence
Length: 413
MSDMPQHPLTAREEFSRGWGVILASTLGIGLGMAAVPTYSMGLFAPYLVREFGWSVGQIMASMSIITLMSLWAGPSYGAWAERIGARRIILVAIPLWGLGFVSLSLLTGSLVQFYLTWLAIGLVGAATLPITFTRAVNRGFDRAKGLALGLAMTGTGLFGIFGKPFLGAVLAAYGWRMGFVAVGLLPVLIAFPAAFFLFREEERSTPDGHHAPVERPGMTTPEALRDWRFWLIAAALVPTSFAMGGPVPNLELILKDGGLSPEQALTVTPLIGLAAIIGRLVGGWLLDRIWAPLVGFVILSLPAFSLWYLGSGLLDVGHARLATFTLGFALGIEYDMVAFFVARYFGLRRYGAIYGLLYVCFAAGAGFSPMVFGHNHDTTGNFHAILSASSVALVICAASFLLLGKYRRFDQ*