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scnpilot_p_inoc_scaffold_23_8

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 21512..23305

Top 3 Functional Annotations

Value Algorithm Source
dihydroxy-acid dehydratase (EC:4.2.1.9) similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 596.0
  • Bit_score: 962
  • Evalue 4.70e-278
dihydroxy-acid dehydratase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3C123 similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 599.0
  • Bit_score: 1008
  • Evalue 2.00e-291
  • rbh
Dihydroxyacid dehydratase/phosphogluconate dehydratase {ECO:0000313|EMBL:EJL32628.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosph similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 595.0
  • Bit_score: 977
  • Evalue 7.00e-282

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1794
ATGTCCGATGCCCAAAAGCCAACGCTGCGTAGCCGCGCATGGTTCGACAATCCGGCCTCGCCCGACATGACCGCGCTCTATCTTGAACGCTATCTCAACTATGGCCTCTCGATGGAGGAACTGCAGTCCAACCGCCCGATTATCGGCATTGCCCAGACCGGCAGCGATCTTTCGCCCTGCAACCGCCATCACATCGTGCTGGCCGAGCGCGTGCGCGACGGCATCCGCGAGGCGGGCGGCATTCCCATCGAATTCCCCTGCCACCCCATTCAGGAAACCGGCAAGCGGCCCACCGCCGGGCTTGATCGCAATCTGGCCTATCTCAGCCTGGTCGAAACGCTGTTCGGCTATCCGCTTGACGGCGTGGTGCTGACCATCGGCTGCGACAAGACGACGCCTGCGTGCCTGATGGCGGCGGCAACGGTCAATATTCCCGCGATTGCCCTGTCGGTCGGCCCGATGCTGAACGGCAATTTCAAGGGCGAGCGCACCGGCAGCGGCACCATCGTGTGGAAGGCGCGCCAGATGCTGGCGGCGGGCGAGATCGACTATAAGGGCTTCATCAAGCTGGTGGCCTCCAGCGCGCCCAGCACGGGCTTCTGCAACACGATGGGCACGGCCACCACGATGAACAGCCTGACCGAGGCGCTGGGCATGAGCCTGCCCGGCAACGCGGCCATCCCCGCGCCCCACCGCGACCGCGCGGAAAGCGCTTATCACACCGGCCGCCAGATCGTGGAAATGGTGCGCGCCGACCGCAAGCCTTCAGACATTCTCACCCGTTCAGCCTTCCTCAACGCCATCCGCGTCAATTCGGCCATCGGCGGCAGCACCAATGCGCCGATCCACCTGAACGCCATCGCGCGCCATGTCGGCGTCGAACTTTCGCTGGCCGATTGGGAAAGCCATGGGGCCGACATTCCGCTGCTGGTCAATCTGCAACCGGCGGGCGAATATCTGGGCGAGGATTATTACCGCGCGGGCGGCGTTCCGGCGGTGATGGGCGAACTCTATCGCGCGGGCCTGCTCGATGGCGAAGCGTTGACGGTCAATGGTTGCACCGTGGCGCAGAATATTGCCGAGGCCGCCATTGAGGATGAGGATGTGATCCGTCCGCTCTCCGCGCCTTTGAAGCCTGCGGCGGGACTGACCGTTCTGTCGGGCAATCTGTTCGACGCGGCGGTGATGAAAAAGAGCGTGATTTCCGATGCTTTTCGCGCGCGCTATCTGGCCGACCCGGATGATCCGGAAGCGTTCGAGGGCAATGTCGTGGTGTTCGACGGGCCGGAGGATTATCATGCGCGCATCGACGATCCCGCCCTTGGCATCACCGACCGCTCGATTCTGGTGATCCGCGGCGCCGGGCCGGTGGGCTATCCGGGCGGGGCCGAGGTGGTCAATATGCGCCCGCCCGCCGCCCTCATCCGCGCCGGGATCGACGCTTTGCCCTGCATCGGCGATGGGCGCCAGTCGGGCACCAGCGGTTCGCCTTCGATCCTTAACGCCAGCCCCGAGGCGGCGGCAGGCGGCGGTCTGGCGCTGCTGCGCACGGGCGATATTGTCCGCATCGACCTGAAGACCCGCAGCGTGAATGTGCTGGTGAGCGACGAGGAACTGGATCGACGCCGCGCTGAAAACGCGGAAAATCCCTTCTCCGGCCCGGAAAGCCAGACGCCTTGGCACGAAATAGCCCGGCGCGAGACGGGGCAATTCGCGGGCGGCGCGGTGATCGAAAGCGCGGTCAAATATCAGCGCATCGCCCAGACCAAGGGCCTGCCCCGCGACAGCCATTAA
PROTEIN sequence
Length: 598
MSDAQKPTLRSRAWFDNPASPDMTALYLERYLNYGLSMEELQSNRPIIGIAQTGSDLSPCNRHHIVLAERVRDGIREAGGIPIEFPCHPIQETGKRPTAGLDRNLAYLSLVETLFGYPLDGVVLTIGCDKTTPACLMAAATVNIPAIALSVGPMLNGNFKGERTGSGTIVWKARQMLAAGEIDYKGFIKLVASSAPSTGFCNTMGTATTMNSLTEALGMSLPGNAAIPAPHRDRAESAYHTGRQIVEMVRADRKPSDILTRSAFLNAIRVNSAIGGSTNAPIHLNAIARHVGVELSLADWESHGADIPLLVNLQPAGEYLGEDYYRAGGVPAVMGELYRAGLLDGEALTVNGCTVAQNIAEAAIEDEDVIRPLSAPLKPAAGLTVLSGNLFDAAVMKKSVISDAFRARYLADPDDPEAFEGNVVVFDGPEDYHARIDDPALGITDRSILVIRGAGPVGYPGGAEVVNMRPPAALIRAGIDALPCIGDGRQSGTSGSPSILNASPEAAAGGGLALLRTGDIVRIDLKTRSVNVLVSDEELDRRRAENAENPFSGPESQTPWHEIARRETGQFAGGAVIESAVKYQRIAQTKGLPRDSH*