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scnpilot_p_inoc_scaffold_59_178

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(171015..172454)

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C450_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 448.0
  • Bit_score: 590
  • Evalue 1.80e-165
  • rbh
MATE efflux family protein {ECO:0000313|EMBL:EIZ78602.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 448.0
  • Bit_score: 590
  • Evalue 2.50e-165
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 463.0
  • Bit_score: 571
  • Evalue 2.40e-160

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAGCGAATTTGTCACCGAAGAAGCGCCGCCTTCCGATGCGCGCCCCCATGGCCACGCCACCCCGATGCGGGGCGATCTGACGCAGGGGCCGATCCTGAAAACGCTGCTGCTGTTTTCGATTCCCACCTTGCTCTCCAACCTGCTGCAAACCCTCAACGGCACGGTCAACTCGATCTGGGTGGGCAAGCTGATCGGGGAAAGCGCGCTGGCGGCCACGGCCAATGTCAACATCATCATGTTCCTGATGATGGCCACGGTGTTCGGCTTTGGCATGGCAACGACCGTGCGCGTGGGGCAATCCTTCGGCGCGCGCGACATGGACAGCGCACGGGTGACTTTCGGCTCGGGCATGGGCTTTTGCGTGGCGCTCTCGGTACTGATCGGCATCATAGGCTCGGTGCTGGCGCCCAAGCTGCTGCATCTGATGGCCACGCCCGAGGCAAGCCGGATCGAGGCGCTCGATTATCTGCGCGTGGTGTTCATCACCATGCCTTTCGGGTCGATTTCGATCATGCTCTCGATGGGTATGCGCGGGGTGGGCGACGCCAAGGTGCCGCTTTTCGCGATGATCCTGACCGTGCTGATCGACATCACGATGAACCCGCTGCTGATCCGCGGCTTTGGCCCAATCCCGGCCATGGGGATTTCGGGTTCGGCATGGTCTACGGCGGCAGCCAATTTCGCCGGGGCGGCGCTGATGCTGGGCTGGATCTATGCGCGCGACCTGCCCTTGCGGCTGCGGGGTGAGGAATGGGCCTATCTGCGCCCACGCGGGGATGAGCTGCGCTTCATCATCGCCAAGGGTCTGCCGATGGGCGCGCAAATGCTGCTGGTCTCCTCGGCCGGTTTGGTGATGGTCGGGCTGGTCAACCGCGAGGGCGTGGCGACCGCTGCGGCCTATGGCGCGTCGATGCAATTGTGGAACTATCTGCAAATGCCCGCCTTTGCCATTGCCAGCGCGGTTTCGGCCATGGTGGCGCAGAATGTCGGCGCGGGGCTGCACAAGCGGGTCAGCAAGATCACGATGCGAGGGCTGATCGTGAACGAGAGCGTGACGGTGACGCTGGCCGTGCTGATCGTGATCTTCGATGCGCCGCTTTTGCGCATGTTCCTTGTGCCCGGCAGCCCGTCGATCCCGATCGCCCAGCATATGCAGCCGATCGTCAGCGTGTCCTTCGTGCTGTTTGGCATCATGATGATCCTGACGGGCACGATGCGGGCTTATGGCGCGGTGATCCTTCCGCTCGTCATCATGTTTGTGGCCATGTATCCGGCGCGCGTGGGCTTCTACTTTGTCGCCTTTCCCTATCTGGGGGCCAATGCGCTCTGGTATGCTTATCCATTCAGCGCGGTGATCGCCGTGGCGATGACCAGCGCGATCTATCTGCGCGGAAACTGGCGCAAGGCGACGCCCAAGGCGGGTGGCCGTCCCGTCTAA
PROTEIN sequence
Length: 480
MSEFVTEEAPPSDARPHGHATPMRGDLTQGPILKTLLLFSIPTLLSNLLQTLNGTVNSIWVGKLIGESALAATANVNIIMFLMMATVFGFGMATTVRVGQSFGARDMDSARVTFGSGMGFCVALSVLIGIIGSVLAPKLLHLMATPEASRIEALDYLRVVFITMPFGSISIMLSMGMRGVGDAKVPLFAMILTVLIDITMNPLLIRGFGPIPAMGISGSAWSTAAANFAGAALMLGWIYARDLPLRLRGEEWAYLRPRGDELRFIIAKGLPMGAQMLLVSSAGLVMVGLVNREGVATAAAYGASMQLWNYLQMPAFAIASAVSAMVAQNVGAGLHKRVSKITMRGLIVNESVTVTLAVLIVIFDAPLLRMFLVPGSPSIPIAQHMQPIVSVSFVLFGIMMILTGTMRAYGAVILPLVIMFVAMYPARVGFYFVAFPYLGANALWYAYPFSAVIAVAMTSAIYLRGNWRKATPKAGGRPV*