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scnpilot_p_inoc_scaffold_59

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Displaying items 1-30 of 343 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_59_1
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70..354
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HHL3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB12527.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
hypothetical protein
scnpilot_p_inoc_scaffold_59_2
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

351..752
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GYE0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKC23874.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
scnpilot_p_inoc_scaffold_59_3
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

912..2777
DNA (1866bp) protein (622aa)
chromosome partitioning protein ParB n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B6AB rbh
ParB-like protein {ECO:0000313|EMBL:KEQ53286.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chloropheno
ParB-like protein
scnpilot_p_inoc_scaffold_59_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2896..3360
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037C61F4
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_p_inoc_scaffold_59_5
unknown

Not on your lists

3353..3466
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_59_6
Exiguobacterium sp. S17, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3620..4129
DNA (510bp) protein (170aa)
ROS/MUCR transcriptional regulator family protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FIF2_9BACL
ROS/MUCR transcriptional regulator family protein {ECO:0000313|EMBL:EPE62010.1}; TaxID=856854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium
transcriptional regulator
scnpilot_p_inoc_scaffold_59_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4132..4353)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T256_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:BAR54380.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
hypothetical protein
scnpilot_p_inoc_scaffold_59_8
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4353..5981)
DNA (1629bp) protein (543aa)
Transposase IS66 n=2 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H915_9SPHN rbh
Transposase IS66 {ECO:0000313|EMBL:EQB09522.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium li
transposase IS66
scnpilot_p_inoc_scaffold_59_9
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6080..6427)
DNA (348bp) protein (116aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAD2A
Scaffold41, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29948.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
IS66 Orf2 like
scnpilot_p_inoc_scaffold_59_10
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8268..8588
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D578_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:KFL46105.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_59_11
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8786..9055
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5D3_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:AHE55584.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
scnpilot_p_inoc_scaffold_59_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9024..9668
DNA (645bp) protein (215aa)
Conjugal transfer protein TraF n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5D2_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:AHE55585.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
traF; conjugal transfer protein TraF
scnpilot_p_inoc_scaffold_59_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9656..10354
DNA (699bp) protein (233aa)
Putative lytic transglycosylase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGJ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55586.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
putative lytic transglycosylase
scnpilot_p_inoc_scaffold_59_14
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10697..12706
DNA (2010bp) protein (670aa)
Conjugal transfer protein TraI n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJS9_9SPHN rbh
Conjugal transfer protein TraI {ECO:0000313|EMBL:KEQ53278.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
conjugal transfer protein TraI
scnpilot_p_inoc_scaffold_59_15
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13053..14327)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003728C8F
Uncharacterized protein {ECO:0000313|EMBL:CCW16480.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
putative glycosyltransferase
scnpilot_p_inoc_scaffold_59_16
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14329..14853)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003806BD1
Uncharacterized protein {ECO:0000313|EMBL:CCW16481.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
scnpilot_p_inoc_scaffold_59_17
unknown

Not on your lists

15184..15414
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_59_18
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16007..17941
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQV6_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
scnpilot_p_inoc_scaffold_59_19
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17971..18732)
DNA (762bp) protein (254aa)
DNA polymerase III epsilon subunit and related 3'-5' exonuclease n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCK1_9SPHN rbh
DNA polymerase III epsilon subunit and related 3'-5' exonuclease {ECO:0000313|EMBL:EAT08889.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
exonuclease
scnpilot_p_inoc_scaffold_59_20
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19034..19951
DNA (918bp) protein (306aa)
Putative nucleotidyltransferase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5C5_SPHJU rbh
Putative nucleotidyltransferase {ECO:0000313|EMBL:KEQ53265.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
DNA-binding protein
scnpilot_p_inoc_scaffold_59_21
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20116..22137
DNA (2022bp) protein (674aa)
conjugal transfer protein TraG n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B1ED rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:KEQ53264.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
traG; conjugal transfer protein TraG
scnpilot_p_inoc_scaffold_59_22
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22134..22565
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJS3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55605.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
scnpilot_p_inoc_scaffold_59_23
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22562..23602
DNA (1041bp) protein (347aa)
Conjugal transfer protein TrbB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJS2_9SPHN
conjugal transfer protein TrbB
Conjugal transfer protein TrbB {ECO:0000313|EMBL:BAK67280.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
scnpilot_p_inoc_scaffold_59_24
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23599..23934
DNA (336bp) protein (112aa)
conjugal transfer protein TrbC n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366C078
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
conjugal transfer protein TrbC
scnpilot_p_inoc_scaffold_59_25
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23931..24203
DNA (273bp) protein (91aa)
UPI0003D00E3E related cluster n=1 Tax=unknown RepID=UPI0003D00E3E
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KEZ21108.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
conjugal transfer protein TrbD
scnpilot_p_inoc_scaffold_59_26
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24197..26641
DNA (2445bp) protein (815aa)
conjugal transfer protein TrbE n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037D4A75 rbh
conjugal transfer protein TrbE
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_p_inoc_scaffold_59_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26683..27459
DNA (777bp) protein (259aa)
Conjugal transfer protein TrbJ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH66_9SPHN rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:ENY82796.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
conjugal transfer protein TrbJ
scnpilot_p_inoc_scaffold_59_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27642..28964
DNA (1323bp) protein (441aa)
Conjugal transfer protein TrbL n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJA5_9SPHN
conjugal transfer protein TrbL
Conjugal transfer protein TrbL {ECO:0000313|EMBL:BAK67275.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
scnpilot_p_inoc_scaffold_59_29
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28966..29781
DNA (816bp) protein (272aa)
Conjugal transfer protein TrbF n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJA4_9SPHN rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KHK91877.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
conjugal transfer protein TrbF
scnpilot_p_inoc_scaffold_59_30
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29778..30806
DNA (1029bp) protein (343aa)
Conjugal transfer protein TrbG n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJA3_9SPHN rbh
conjugal transfer protein TrbG
Conjugal transfer protein TrbG {ECO:0000313|EMBL:BAK67273.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
Displaying items 1-30 of 343 in total

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