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scnpilot_p_inoc_scaffold_59

Search features with annotation key words

Displaying items 121-150 of 343 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_59_121
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107595..109502
DNA (1908bp) protein (636aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide
protease IV (EC:3.4.21.-)
Protease IV n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3P8_9SPHN
scnpilot_p_inoc_scaffold_59_122
unknown

Not on your lists

comp(109506..109919)
DNA (414bp) protein (138aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_59_123
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110293..111807
DNA (1515bp) protein (505aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TIG_NOVAD rbh
tig; trigger factor
scnpilot_p_inoc_scaffold_59_124
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111875..113347)
DNA (1473bp) protein (491aa)
Putative dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQG5_9SPHN
putative dioxygenase
Putative dioxygenase {ECO:0000313|EMBL:BAK68339.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK
scnpilot_p_inoc_scaffold_59_125
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113596..114261
DNA (666bp) protein (222aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sphingomonas sp. LH128 RepID=J8W220_9SPHN rbh
scnpilot_p_inoc_scaffold_59_126
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114389..115645
DNA (1257bp) protein (419aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=CLPX_NOVAD rbh
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosph
scnpilot_p_inoc_scaffold_59_127
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115716..116207)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WUC8_9SPHN
glutathione-dependent formaldehyde-activating protein Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
aldehyde-activating protein
scnpilot_p_inoc_scaffold_59_128
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116221..117099)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQI8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD47644.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
rarD protein
scnpilot_p_inoc_scaffold_59_129
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117192..118643)
DNA (1452bp) protein (484aa)
astD; succinylglutamic semialdehyde dehydrogenase (EC:1.2.1.-)
Succinylglutamic semialdehyde dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z6X1_9SPHN
Succinylglutamic semialdehyde dehydrogenase {ECO:0000313|EMBL:EGD59781.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
scnpilot_p_inoc_scaffold_59_130
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118761..120200)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C4Y4_9SPHN rbh
Selenoprotein O {ECO:0000313|EMBL:KHL26410.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercuriali
hypothetical protein
scnpilot_p_inoc_scaffold_59_131
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120281..121147
DNA (867bp) protein (289aa)
Putative hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHL0_9SPHN
Putative hydrolase {ECO:0000313|EMBL:GAD47640.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_59_132
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121144..122286
DNA (1143bp) protein (381aa)
Group 1 glycosyl transferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VLV6_9SPHN rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:KHK89682.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_59_133
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122429..123370
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9T5_NOVAD
Mlr7403 protein {ECO:0000313|EMBL:GAO53676.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_59_134
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123403..124761
DNA (1359bp) protein (453aa)
Outer membrane protein assembly factor BamB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHZ8_9SPHN
Outer membrane protein yfgL, lipoprotein component of the protein assembly complex {ECO:0000313|EMBL:GAO53675.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
pyrrolo-quinoline quinone
scnpilot_p_inoc_scaffold_59_135
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124804..126108
DNA (1305bp) protein (435aa)
protein-S-isoprenylcysteine methyltransferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6297B
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:CCA91468.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
scnpilot_p_inoc_scaffold_59_136
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126105..127475)
DNA (1371bp) protein (457aa)
Glutamate--cysteine ligase {ECO:0000313|EMBL:GAO53672.1}; EC=6.3.2.2 {ECO:0000313|EMBL:GAO53672.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
Glutamate--cysteine ligase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ECU2_9SPHN rbh
glutamate--cysteine ligase
scnpilot_p_inoc_scaffold_59_137
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127556..128317)
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHZ4_9SPHN
16S ribosomal RNA methyltransferase RsmE
scnpilot_p_inoc_scaffold_59_138
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128353..129276
DNA (924bp) protein (308aa)
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:GAO53670.1}; EC=2.5.1.39 {ECO:0000313|EMBL:GAO53670.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
ubiA; 4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.-)
Prenyltransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z6Y1_9SPHN rbh
scnpilot_p_inoc_scaffold_59_139
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129286..132702)
DNA (3417bp) protein (1139aa)
Chromosome partition protein Smc n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II33_9SPHN
chromosome segregation protein
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
scnpilot_p_inoc_scaffold_59_140
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132712..133467)
DNA (756bp) protein (252aa)
Protein-disulfide isomerase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C4Z0_9SPHN
Protein-disulfide isomerase {ECO:0000313|EMBL:EIZ78867.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
protein-disulfide isomerase
scnpilot_p_inoc_scaffold_59_141
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133505..134224)
DNA (720bp) protein (240aa)
Protein-disulfide isomerase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VFR8_9SPHN
Protein-disulfide isomerase {ECO:0000313|EMBL:EJU11637.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
protein-disulfide isomerase
scnpilot_p_inoc_scaffold_59_142
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134254..134835)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N932_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC63809.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_59_143
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134864..135949
DNA (1086bp) protein (362aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CCA91479.1}; EC=3.2.2.- {ECO:0000313|EMBL:CCA91479.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
A/G-specific adenine glycosylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II37_9SPHN
scnpilot_p_inoc_scaffold_59_144
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135952..136833
DNA (882bp) protein (294aa)
NAD+ diphosphatase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VW19_9SPHN rbh
NAD+ diphosphatase {ECO:0000313|EMBL:EJU11641.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH1
NUDIX hydrolase
scnpilot_p_inoc_scaffold_59_145
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136837..137196
DNA (360bp) protein (120aa)
DGPFAETKE family protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035E24C5
PhnB protein {ECO:0000313|EMBL:CCW16604.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD3
hypothetical protein
scnpilot_p_inoc_scaffold_59_146
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137200..137607)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9R4_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHS48171.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_p_inoc_scaffold_59_147
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137607..139046)
DNA (1440bp) protein (480aa)
Magnesium transporter n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9R3_NOVAD rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
magnesium transporter
scnpilot_p_inoc_scaffold_59_148
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139214..139681
DNA (468bp) protein (156aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Novosphingobium RepID=F6II42_9SPHN
cyclophilin type peptidyl-prolyl cis-trans isomerase
scnpilot_p_inoc_scaffold_59_149
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139843..141603
DNA (1761bp) protein (587aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA26_NOVAD rbh
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABD25297.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
scnpilot_p_inoc_scaffold_59_150
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141600..142487)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HUJ9_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EQB15808.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
LysR family transcriptional regulator
Displaying items 121-150 of 343 in total

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