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scnpilot_p_inoc_scaffold_59_137

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(127556..128317)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 249.0
  • Bit_score: 369
  • Evalue 4.80e-99
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHZ4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 249.0
  • Bit_score: 369
  • Evalue 3.40e-99
16S ribosomal RNA methyltransferase RsmE similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 247.0
  • Bit_score: 349
  • Evalue 1.00e-93

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGAGCGATCATCTTCCAGCCACTCCGGCATGGCCCCCGCGCAGCGCGCCGCGCCTGTTCGTCGAAACGCCCCTGTCCGCCGGGGCACAGGTCAGCATTGACGGGCCGCAGGCGCATTATCTGGGCCGCGTTATGCGCGTGGGGCCGGGCGATGCGGTGATCCTGTGCGATGATGTGTCAGGCGAATGGGCGGCGCGGGCCGTCTCGGTGGGCAAGCGCGATCTGGTGCTGGAATGCGTGGACCTGTTGCGCGAGCGCGAGGCGGTGCCCGATTTCACGCTTTGCGCGGGGCTGCTCAAAAAGGACCGCTTCGATCTGGTGTTGGAAAAGGCCTGCGAATTGGGGGTACGCCATATTCAGCCGGTGCTGACGCGGCGATGCGTGGCAGATAAGTTGAATTTGGACCGCGCCCGCGCCACGCTGATCGAGGCGGCCGAGCAATGCGCGCGCACCGCCTTGCCCACGATTGCCGCACCGATGCGATTAGATGCCTTGCTGCGCGATTGGGAGGCGCCGCGCGCCCTATTCTTTGCCGATGAGCAGGGCGGCGCGCCCGCGCTGGGTACCTTTGCCGCCCATGCCGGCCCCGCTGCGCTGCTGACCGGGCCAGAGGGCGGCTTTACCGATGAGGAGCGCGCCGCCATCCGCGCCCATTCATCGGCCCATGCGATTACACTGGGCCCGCGCATTTTGCGGGGCGAAACCGCCTGTATCGCGGCCACCGCGCTGTGGATGGGCGGGATGGGTGACTGGGGCGCATAA
PROTEIN sequence
Length: 254
MSDHLPATPAWPPRSAPRLFVETPLSAGAQVSIDGPQAHYLGRVMRVGPGDAVILCDDVSGEWAARAVSVGKRDLVLECVDLLREREAVPDFTLCAGLLKKDRFDLVLEKACELGVRHIQPVLTRRCVADKLNLDRARATLIEAAEQCARTALPTIAAPMRLDALLRDWEAPRALFFADEQGGAPALGTFAAHAGPAALLTGPEGGFTDEERAAIRAHSSAHAITLGPRILRGETACIAATALWMGGMGDWGA*