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scnpilot_p_inoc_scaffold_59_150

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(141600..142487)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HUJ9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 295.0
  • Bit_score: 444
  • Evalue 7.50e-122
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EQB15808.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 295.0
  • Bit_score: 444
  • Evalue 1.10e-121
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 295.0
  • Bit_score: 435
  • Evalue 1.30e-119

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCCCGCCACCCGCCGCCTGCCCCCCCTGCGCGCGCTGGAAGCCTTTGTCCGCACGGTCCGCCTTGGTTCGGCCAAGGCCGCGGCCAGCGAATTGGGCCTGAGCCCTTCTGCGCTGTCCCGCCGCGTGGGCGCGCTGGAGGATTTCGTGGGCAAGCGCCTGTTTACACGGCAGCATCAGGCAATGAAGCTGACCGATGACGGCCATGCCTTTTACGCCGCCGTCAGCCCCAAGCTGGAAGATCTGGCCGAGGCGGTCGAATCGCAGATGGAGGCCAGCAATGTGATGCGCCTGCATCTGGGCGTTCCCGCGCTGTTTGCGGGCACGCGCCTGTTTCCGCGCCTGCCCGAATTGCGCAAGTTGCATCCGCGGCTGCATATCGACTTTGACACCGGGGCGCAGCTCGAATCGGAACTGGGCGATTCGATTGATGCGGCCATCGTGCTGTCCAAGGAGCCTGACCCCGCGCTCCATTCGGTGCGGCTCGATCATAACAAGATCCACGCTTTCGCCTCGCCCGCGCTGGCCGCCGAGATTGGCGCGACACCCGATCTGGCCCGCCTGTCAAAGCAGACTTTCGTGATCTCTACCGATCTGCCCGAAAGCCTTGATGTGTGGAAAGGTGCGCTGGGACTGGAGCGACTGGAACCGGCCGCGATCGACCATTTCGATTCGGCCCAGCTTATCATTGCCGCAGCGGTTCAGGGGCTGGGCATCGCCATCGTCCATGACGACCACTTTTTGCGTCCCGGCGATGACCGTCTGGTCCGCCTGTTCGACGCCGATATCGACAGCCCCTACAGCTATTGGTTCGTGTGCCGCCCGCGCGCGCTGGAAACGCGCCCGGTGCGGATTTTCCACGATTGGCTGATCAAGGCCGGGCTTTAA
PROTEIN sequence
Length: 296
MPATRRLPPLRALEAFVRTVRLGSAKAAASELGLSPSALSRRVGALEDFVGKRLFTRQHQAMKLTDDGHAFYAAVSPKLEDLAEAVESQMEASNVMRLHLGVPALFAGTRLFPRLPELRKLHPRLHIDFDTGAQLESELGDSIDAAIVLSKEPDPALHSVRLDHNKIHAFASPALAAEIGATPDLARLSKQTFVISTDLPESLDVWKGALGLERLEPAAIDHFDSAQLIIAAAVQGLGIAIVHDDHFLRPGDDRLVRLFDADIDSPYSYWFVCRPRALETRPVRIFHDWLIKAGL*