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scnpilot_p_inoc_scaffold_59_336

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(345801..346271)

Top 3 Functional Annotations

Value Algorithm Source
Heat shock protein Hsp20 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6S0_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 156.0
  • Bit_score: 222
  • Evalue 3.20e-55
16 kDa heat shock protein A {ECO:0000313|EMBL:GAO55975.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 156.0
  • Bit_score: 225
  • Evalue 5.30e-56
heat shock protein Hsp20 similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 156.0
  • Bit_score: 222
  • Evalue 9.10e-56

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGACCCGTTTTGATTTCACTCCCTATCGCCGCAACACCGTTGGCTTTGACCGTTTGTTCGACCTGCTGGAAAACGCCAATCGTGCGGGGGCGAGCGACAATTATCCCCCCTTCAACATCGAGCGCAAGGGCGAGGATTCCTATCGCATCACGCTGGCCGTCGCCGGGTTCAAGCCCGCCGATATCGAAATCGTCGCGCAGCAGAACCTGCTGGTCATTCAGGGCCGCAAGCATGACGAACAAAGCGCCGCGCAGAGCGAATTCCTCCACCTCGGCATTGCCCAGCGCGGGTTTGAGCGCCGCTTTGAACTGGCCGATTTCGTCCGGGTCGAGGCGGCCAATCTTGAAGACGGCCTGCTGGTCATCGACCTGATCCGCGAAGTGCCCGAGGCGATGAAGCCCAAGAAGATCGCCATCGGCACCGCAGGCCCCGCCTCGCTGACCGTGGTGGAAGGCAAGAACGCGGCCTGA
PROTEIN sequence
Length: 157
MTRFDFTPYRRNTVGFDRLFDLLENANRAGASDNYPPFNIERKGEDSYRITLAVAGFKPADIEIVAQQNLLVIQGRKHDEQSAAQSEFLHLGIAQRGFERRFELADFVRVEAANLEDGLLVIDLIREVPEAMKPKKIAIGTAGPASLTVVEGKNAA*