ggKbase home page

scnpilot_p_inoc_scaffold_80_30

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 38561..40333

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3U3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 593.0
  • Bit_score: 602
  • Evalue 3.30e-169
  • rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EGD60733.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 593.0
  • Bit_score: 602
  • Evalue 4.60e-169
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 570.0
  • Bit_score: 253
  • Evalue 1.40e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1773
ATGAAACACGCCCGCTTCACGCTGGTTGAGAACAACCCCGCCCCGGCCTCTGGTCAGACCGCCGATGCGCAGGCGGGCATGGCCGATATTGTCGCCAGCCTTGATTCCCGCTTCATCCCGGCGGGCGAAACGCTGGCGCGGCTGGTCGAGGCGATGGGGGCGGTCCTGTCGGGCCTCGACACGATGAGCCGCGTGCTGGGCGAGGATTCGGGCGAGGACAGTGAGGCCGCCGAGGCGCTGCTCTGCGCCGCCCGGCAATTGCGCGAGGCCCCCGCGCGGCAGGCCGAAAGGTCGCGTCAGGTCACCGCTCTGGCCGCCGTGATGCAGCAGTTGGGCACCCATTCGGCGGAAATTGCGCGCATATTGACCGTGCTGGAATTCTATACGGTTAATCTGAAGATCGCGGCGGCGGGTGCCGATGAATTTGTCGAATTTGCCAATGATATGAGCGTGAAGCTGAAATCGGGCAGCCGCGAGGTCGAGGCTTTCAACAATCAGATCAAGCTGATGCAGTCCAGTCTGGCCGATATGCGGCGGGTGGACGATGTGCTGGCGCGCGAATGCGCCCGCGTGATCCCGCAGGTGCCCGACCGGCTGGTGCGCGAGGTTGATCAATTGCGCTCGCGCCAGATGTGGCTGGCGCAGGTGGCCGCCTTTTCGCGCGACATTATCCTGCGCCTGCAATCGCGGGTGGGCGATGCGCTGGGGGCGATGCAAATCGGCGATATCACCCGCCAGCGGCTCGAGCATGTGCTCGATGGCTGCCGTGCGCTGGAACAGGTGCTGGCCGATCCGGCCGCGCTCGATGCCGCCGGAACGCGCGGCCATATGCTGCGCCTCTATGGCGACCAACTGGGCGATCTGGCCGGGGACTTCATCGCCCAGACCGGCGATCTGCTCGACGCGCTGGGGGCGCTGGGGCCCGATTGCGCGGAATTGCTGAGCCATGGCCACCGCGATGACATGATGCAGCAAAACGGCCATTTCCTGCGCGATTTGGGCGATTGCATCGCGGGCGCCCGTGGCATGACCAGCCAGTTGCAGCGCGCCAATGAAAAGGCCGTCGAGATCGCCGATGTCGTGGTGCAGGTGGTCCATGCTCTGCGCCAGCGGGTGCAGACGATCGAGAGCCTGCGTTTCGATGTCGATTATATGGCGATCAATGTGAACATCCGCGCTCGCCGGGATGCCCAGATCGGGCGGCCTGTCGCGGTGATCGCCGATGAAATCCGCATCTGCTCCCAGCAACTGGCCGAGCTGATCCTGGGCATTGCCAAGGTGGCCGATGATCTGGGCGTTCGCAGCGAGGCCTTTGAAATCGGTCATGAGGCCGGTGCGCAATCGGGCGTGGACACGATGCTGACCAATGCGCTCTCGATCATCCAGCAGGGCGCGGGCCAGAGCGAGGAGGCAATGTCCGAGGTCGATCGGCGCGCCCAGGGCATTGCGGGCATGATCGATGTGGCCTGCGACGAATTGTCGATCTGCGGCGAATTGTCGGAAAGCCTGCGCGCAATGACGGACAGTTTCGCCGTGCTGGCCGGGGCGGATCAGGCCGACCCGGATGCCGCATCCCCGCATCCCGCCGCCGCGCTGATGGAGGATCTGGCCCGCCGCTATACGATGAGCAGCGAGCGCCGGGTGCATGACCGCCATCTGTTGCCCGGCATGGCGCCGTTGACGGGGGCTTCAACGGGCCATGCCGGGACTTCGGGCGCCATCAGTCCGCCGCCGGATGATGATGACGCCCTGTTCGATGACGCGCTGTTTTAG
PROTEIN sequence
Length: 591
MKHARFTLVENNPAPASGQTADAQAGMADIVASLDSRFIPAGETLARLVEAMGAVLSGLDTMSRVLGEDSGEDSEAAEALLCAARQLREAPARQAERSRQVTALAAVMQQLGTHSAEIARILTVLEFYTVNLKIAAAGADEFVEFANDMSVKLKSGSREVEAFNNQIKLMQSSLADMRRVDDVLARECARVIPQVPDRLVREVDQLRSRQMWLAQVAAFSRDIILRLQSRVGDALGAMQIGDITRQRLEHVLDGCRALEQVLADPAALDAAGTRGHMLRLYGDQLGDLAGDFIAQTGDLLDALGALGPDCAELLSHGHRDDMMQQNGHFLRDLGDCIAGARGMTSQLQRANEKAVEIADVVVQVVHALRQRVQTIESLRFDVDYMAINVNIRARRDAQIGRPVAVIADEIRICSQQLAELILGIAKVADDLGVRSEAFEIGHEAGAQSGVDTMLTNALSIIQQGAGQSEEAMSEVDRRAQGIAGMIDVACDELSICGELSESLRAMTDSFAVLAGADQADPDAASPHPAAALMEDLARRYTMSSERRVHDRHLLPGMAPLTGASTGHAGTSGAISPPPDDDDALFDDALF*