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scnpilot_p_inoc_scaffold_80_31

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(40330..41733)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z516_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 453.0
  • Bit_score: 468
  • Evalue 1.00e-128
  • rbh
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:EGD60055.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 453.0
  • Bit_score: 468
  • Evalue 1.40e-128
RND transporter similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 465.0
  • Bit_score: 416
  • Evalue 9.80e-114

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGTTGCGCAATAACAAGCGCTGGATCGGGCTGCTGCCCCTGCTGGCGGCGGCATGCAGTCAAGCCCCCGCCTATCATCCGCCGGTCGCCCCCCTGCCCGCCAAATTCGCCGATGCCGACAAGGTATGGGGCGAGGCCCAGCCCGCCGCGCCGCAGGTGGACAAGACATGGTGGCGCGCGCTGGGGGATCCCGGTCTGGACGCGATGGAGGACCGGCTGGAGCAGGACAATCCCAGCCTTGCCGTCATCCTTGCCAAGCATCGTCAGGCCATGGCCGCGCTGCGCCAGAGCAAGGCGGCCACGATGCCCGATGTGGAATCGAGCGGCACATTGACCCGCAACCGGCAATCGGACGACCGTCCGTTACGCGGCGGAACCCAGCCCGCCTATTACGAGGCCGATACGGTGGGCGCCAGCGTCAGCTATGAACTGGACCTGTGGGGCCGGGTGCGCGACAGCGTGAAGGCCGCGCGCGCCAATGCGCAGGCCAGCGCCGAAGACGCCGCCGCGCTGCGCCTTGCCCTTCAGGCCGATCTGGCCAGCACATGGGCGGCGATGCGCGGGGCCGATCTGGAAATCGCGATCCTGTCGGACGCCGTGGGCGCCTATCAGCGCGCCGATGATGTGACGCATCACCGCTATGACGGCGGCATTGCCACCGGCATCGATGTGGGCCGCGCCGATGCGCAATTGGCCGATGCGCAGGCGCAATTGGCGCAGGTGCGCGCCCAGCGCGCGGTGCTGGCCCATGCGGTGGCCACGCTGGCGGGCATTCCGGCGGGCGAGGAAAAGATCGACACGCTCGACCATCCGCTCTCGGTGATCGGCGCGCCGACGGCCCTGCCCGCCGCCTTGCTGCAACGCAGGCCCGATATCGCTGCGGCCGAAAGGCGGATGTATGCCGCCAATCGTGCCATCGGCGTGGCCCGCGCCGCGCGTTTCCCCCAGATCTCGCTGGGCGGCAATGGCGGTTTTCAGAGTATGGCGGTGTCCAGCCTGATTTCAGCGCCCAATGCTTTCTGGGCGCTGGGGCCGCAATTCTCCCTGCCGATCTTTGACGGCGGCCGGATCAAGGCCCGCATCGAATCCGCCCGCGCCGATTGGGATGCCGCCGCCGCCAATTATCGCGGCAGCGTGCTTCAGGCCATGCGCGAGGTCGAGGACGGTCTGACCTCGATGGACCAGTTGCAGCAGGAAAGCGCCGCGCAAAACCGCGCCGCCGACGCGGCGGGCAAGGCGTCCAAACTGTCCTATGAACTTTATATCAAGGGCGCGAACACGCTGCTCGACGTGGTGACGGCCGAGACCGCCGAACTGGCCGCCCGCCGCCGCGCCGCGCAGGTCGCCACCCAAAGGGTGCAGACCAGCATCGCCCTTGTCCGCGCGCTGGGAGGAGCGGCCTAA
PROTEIN sequence
Length: 468
MLRNNKRWIGLLPLLAAACSQAPAYHPPVAPLPAKFADADKVWGEAQPAAPQVDKTWWRALGDPGLDAMEDRLEQDNPSLAVILAKHRQAMAALRQSKAATMPDVESSGTLTRNRQSDDRPLRGGTQPAYYEADTVGASVSYELDLWGRVRDSVKAARANAQASAEDAAALRLALQADLASTWAAMRGADLEIAILSDAVGAYQRADDVTHHRYDGGIATGIDVGRADAQLADAQAQLAQVRAQRAVLAHAVATLAGIPAGEEKIDTLDHPLSVIGAPTALPAALLQRRPDIAAAERRMYAANRAIGVARAARFPQISLGGNGGFQSMAVSSLISAPNAFWALGPQFSLPIFDGGRIKARIESARADWDAAAANYRGSVLQAMREVEDGLTSMDQLQQESAAQNRAADAAGKASKLSYELYIKGANTLLDVVTAETAELAARRRAAQVATQRVQTSIALVRALGGAA*