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scnpilot_p_inoc_scaffold_80_102

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(122345..123118)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256 similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 236.0
  • Bit_score: 397
  • Evalue 1.70e-107
tRNA/rRNA methyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G643_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 236.0
  • Bit_score: 397
  • Evalue 1.20e-107
  • rbh
tRNA/rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 236.0
  • Bit_score: 397
  • Evalue 3.40e-108

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAACCTGTTATCGTCCTCGTCCGCCCGCAACTGGGCGAGAATATCGGCAAGGCGGCGCGCGCCATGCTCAATTTTGGTCTGGTCGAAATGCGGCTTGTCAGCCCCCGTGATGGCTGGCCCAACCCCAGCGCAGGCCCGGCCGCCGCGGGCGCCGACATCGTGCTGGAACAGGCCAAGGTGTTCGAGACGCTGGCGGAGGCGGTGGCCGATTGCCCGCATGTCTATGCCACCACGGTGCGCAAGCGCGGCGTGACAAAGCCAGTGCTGACACCTGAGGCCGCCACGCGCGAAATCCACGCTCAGCCGGGGCGCAGCGCGATCATCTTTGGCCCCGAACGTTCGGGTCTGGAAACCGACGATGTGGCACTGGCCCGCGCGATTATCACCGTGCCGATCAATCCCGAATTCGGCTCGCTCAATCTGGCGCAGGCGGTGATCCTGTGCGCCTATGAGTGGTCGAAAGATGTCGCGCTGGAGCAGCCACCGGTTGAGGAAATCCTGCCCCCTGCCCCGCAGGAAGAGCTGGAGGGGCTGATCAATCATCTCGACAGCCTGCTGGAGCCGCGCGGCTATTATTTCCCCGAGGCGCGGGCCGATGCCACGCGGCGCACGCTGCGCACCATGCTGACCAAACCGGCGTGGAACCATCTGGAAGTGCGCACGATGCGCGGGGTTCTCTCCGCACTGATGCGCCAGCCCGGCGTGCCGCCGCCGCCGCGCGTGAAGCCCGCTCCTAAACCGAAAGACGAATCCGGCAACACAGGGGATTGA
PROTEIN sequence
Length: 258
MKPVIVLVRPQLGENIGKAARAMLNFGLVEMRLVSPRDGWPNPSAGPAAAGADIVLEQAKVFETLAEAVADCPHVYATTVRKRGVTKPVLTPEAATREIHAQPGRSAIIFGPERSGLETDDVALARAIITVPINPEFGSLNLAQAVILCAYEWSKDVALEQPPVEEILPPAPQEELEGLINHLDSLLEPRGYYFPEARADATRRTLRTMLTKPAWNHLEVRTMRGVLSALMRQPGVPPPPRVKPAPKPKDESGNTGD*