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scnpilot_p_inoc_scaffold_80_485

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(488132..489556)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFS1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 474.0
  • Bit_score: 737
  • Evalue 6.90e-210
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 474.0
  • Bit_score: 737
  • Evalue 1.90e-210
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CCA93579.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 474.0
  • Bit_score: 737
  • Evalue 9.70e-210

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
ATGGCAGAGACCGAACAGCGCCTGCTGATGCTGATCGACGATGAGCCGGCCCAGAGCCGCCTGATCACCGCGCTGGCCGCGCGCGAGGGCTGGCGGACGCTGGTGGTGGGCGATGCCGAAACGGCCGTGGCCATGCTGGGCACGCGGCAGGGCATGCAATTGGGCGCGGTGATCCTTGACCAATGGGTGCCGGGCGATGAAGCCTGCTCGCTGATCGCCGATCTGCGCAGCCGCCGCCCCGCCCTGCCGATCCTGATGCTGACAACCTCGGCCTCGCCGCTGCTGGCGGTTGAAGCGATGCGCGCGGGTGCAACCGATTACCTCATCAAGCCCATCGCGCCCGACCGGTTGATGAGCGCCCTGCGCAACGCCACCACGCGCGAAACGCCGCGCGATGAATTGCAGCCGTTGACCGAAAAGATGAACGGTCCGGCCGATTTTGAATCGATGATTGGTGCAGCTCCGGCCTTCCGCACGGCGCTTGCCATCGCCGCCAAATCCGCGCGCGGCCAGGGCCATCTGCTGATCGAGGGCGAGAGCGGCACCGGCAAGGAAATGCTGGTGCGCGCCATCCACGCCGCATCGCAGCGCGCCAAAATGCCGCTGCGCATCGTCAATGCGGGATCGACGCCGGGCAATTCCATCGAATCCGCACTGTTCGGCCATGAAAAGGGCGCCTTTCCCGGCGCTTTCGACCGCCAGATGGGCGCGATCCAATATTGCGACGGCGCCACGCTGGTCATCGACGAAATCGACCGCCTGCCGATGGGCGTTCAGGAGCGGCTGGCCGAATATCTGACCACAGGATCATGCCGCCCGATCGGCGCGCGCCATGCCTTCCGGGTGGATGTGCGGCTGATCGCGGCGTCGAATTATCCGCTCAAGGATCTCATCGTCCATGGCGATTTCCTGCCCGAACTCCACGCCGCGATCTGCGCGACCACGGTGTCGCTGCCGCCGCTGCGCGCGCGGCTGGGCGATATTCCGGCGCTGGCGCGGCATTTCCTCGCCCGCATCGGCGAGCAACCGGGCCTGCGCGAACTGGGCATCACCGATGGCGCGCTGTCGCTGCTCTCGGCCTATGACTGGCCCGGCAACGTGCGCCAACTTCAGGCTGTCCTGTTCCGCGCCGCCGTCTTCTGCGATGGCGACGCGCTGACCGCCGACGATTTCCCCCAACTCTCCAGCATGATCTCCGCCGAGCCGATGAGCCCCAGCAATGGCGTGGCCCACGAAAGCGCGGGCGTGATGCTGTTTACCGCCGATGGCAATCTGCGCCCCCTGGAGGACATCGAGGCGGACGTGATCCGGCTGGCCATCGGGCATTACCGGGGCCGCATGACCGAAGTGGCGCGGCGGCTGGGGATCGGGCGTTCGACACTGTATCGAAAGTTGAGCGAGCTTGGGATTGGGGACGCGGCGTAA
PROTEIN sequence
Length: 475
MAETEQRLLMLIDDEPAQSRLITALAAREGWRTLVVGDAETAVAMLGTRQGMQLGAVILDQWVPGDEACSLIADLRSRRPALPILMLTTSASPLLAVEAMRAGATDYLIKPIAPDRLMSALRNATTRETPRDELQPLTEKMNGPADFESMIGAAPAFRTALAIAAKSARGQGHLLIEGESGTGKEMLVRAIHAASQRAKMPLRIVNAGSTPGNSIESALFGHEKGAFPGAFDRQMGAIQYCDGATLVIDEIDRLPMGVQERLAEYLTTGSCRPIGARHAFRVDVRLIAASNYPLKDLIVHGDFLPELHAAICATTVSLPPLRARLGDIPALARHFLARIGEQPGLRELGITDGALSLLSAYDWPGNVRQLQAVLFRAAVFCDGDALTADDFPQLSSMISAEPMSPSNGVAHESAGVMLFTADGNLRPLEDIEADVIRLAIGHYRGRMTEVARRLGIGRSTLYRKLSELGIGDAA*