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scnpilot_p_inoc_scaffold_80

Search features with annotation key words

Displaying items 481-510 of 577 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_80_481
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(484204..484719)
DNA (516bp) protein (172aa)
Acetyltransferase-like n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFS9_9SPHN
acetyltransferase-like protein
Acetyltransferase-like {ECO:0000313|EMBL:CCA93587.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_p_inoc_scaffold_80_482
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

484753..485394
DNA (642bp) protein (214aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Sphingomonas sp. LH128 RepID=J8VK65_9SPHN
scnpilot_p_inoc_scaffold_80_483
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

485612..486805
DNA (1194bp) protein (398aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
DNA methylase N-4/N-6 n=1 Tax=Sphingomonas sp. LH128 RepID=J8W0E6_9SPHN rbh
modification methylase
scnpilot_p_inoc_scaffold_80_484
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

486825..487910
DNA (1086bp) protein (362aa)
Dihydropteroate synthase {ECO:0000313|EMBL:GAO56523.1}; EC=2.5.1.15 {ECO:0000313|EMBL:GAO56523.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
Dihydropteroate synthase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIE4_9SPHN
dihydropteroate synthase
scnpilot_p_inoc_scaffold_80_485
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(488132..489556)
DNA (1425bp) protein (475aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFS1_9SPHN
sigma-54 dependent DNA-binding response regulator
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CCA93579.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobi
scnpilot_p_inoc_scaffold_80_486
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

489791..489916
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:EGD58555.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_80_487
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

489927..491057
DNA (1131bp) protein (377aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G790_NOVAD
Alanine dehydrogenase {ECO:0000313|EMBL:KHS48358.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
alanine dehydrogenase
scnpilot_p_inoc_scaffold_80_488
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

491070..491366
DNA (297bp) protein (99aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F9F2C1
pyridine nucleotide transhydrogenase
Pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:AJP73183.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
scnpilot_p_inoc_scaffold_80_489
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

491366..492958
DNA (1593bp) protein (531aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G788_NOVAD rbh
NAD(P) transhydrogenase subunit beta
scnpilot_p_inoc_scaffold_80_490
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

492972..493277
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6A36B
Uncharacterized protein {ECO:0000313|EMBL:GAO56012.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_80_491
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

493551..494711
DNA (1161bp) protein (387aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L571_9SPHN rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
deoxyguanosinetriphosphate triphosphohydrolase
scnpilot_p_inoc_scaffold_80_492
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

495066..496253
DNA (1188bp) protein (396aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
Aminomethyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGU7_9SPHN rbh
gcvT; glycine cleavage system aminomethyltransferase T
scnpilot_p_inoc_scaffold_80_493
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

496250..496621
DNA (372bp) protein (124aa)
Glycine cleavage system H protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G782_NOVAD
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
glycine cleavage system protein H
scnpilot_p_inoc_scaffold_80_494
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

496628..497983
DNA (1356bp) protein (452aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796}
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GCSPA_NOVAD rbh
scnpilot_p_inoc_scaffold_80_495
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

497983..499536
DNA (1554bp) protein (518aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphi
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase subunit 2 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L575_9SPHN rbh
scnpilot_p_inoc_scaffold_80_496
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(499587..500492)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IW49_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB13919.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
transporter
scnpilot_p_inoc_scaffold_80_497
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(500572..502089)
DNA (1518bp) protein (506aa)
Type II secretion system protein E n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G777_NOVAD rbh
Type II/IV secretion system ATP hydrolase tadA/virB11/cpaF, tadA subfamily {ECO:0000313|EMBL:GAO56023.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
type II secretion system protein E
scnpilot_p_inoc_scaffold_80_498
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

502220..502549
DNA (330bp) protein (110aa)
HNH endonuclease n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A0CBA1
Uncharacterized protein {ECO:0000313|EMBL:EZP71604.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas pau
hypothetical protein
scnpilot_p_inoc_scaffold_80_499
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502650..502907)
DNA (258bp) protein (86aa)
F-type H+-transporting ATPase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IQ26_9SPHN
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
scnpilot_p_inoc_scaffold_80_500
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502911..504347)
DNA (1437bp) protein (479aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ATPB_NOVAD rbh
scnpilot_p_inoc_scaffold_80_501
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(504377..505249)
DNA (873bp) protein (291aa)
ATP synthase gamma chain n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8M9_9SPHN rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=9839
ATP synthase F0F1 subunit gamma
scnpilot_p_inoc_scaffold_80_502
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(505280..506809)
DNA (1530bp) protein (510aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ATPA_NOVAD rbh
scnpilot_p_inoc_scaffold_80_503
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(506876..507430)
DNA (555bp) protein (185aa)
ATP synthase subunit delta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ATPD_NOVAD
ATP synthase F0F1 subunit delta
ATP synthase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; S
scnpilot_p_inoc_scaffold_80_504
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

507717..508745
DNA (1029bp) protein (343aa)
ada; Regulatory protein ada (EC:2.1.1.63)
AraC family transcriptional regulator,regulatory protein of adaptative response n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WGW8_9SPHN
AraC family transcriptional regulator,regulatory protein of adaptative response {ECO:0000313|EMBL:EIZ79541.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sp
scnpilot_p_inoc_scaffold_80_505
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(508730..510901)
DNA (2172bp) protein (724aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1348853 species="Bacteria;
primosomal protein N' (EC:3.6.1.-)
Primosomal protein N' (Replication factor Y) (Superfamily II helicase) n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IQ56_9SPHN rbh
scnpilot_p_inoc_scaffold_80_506
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

511044..511694
DNA (651bp) protein (217aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom
translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WJ00_9SPHN rbh
scnpilot_p_inoc_scaffold_80_507
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

511714..513528
DNA (1815bp) protein (605aa)
cobaltochelatase CobT (EC:6.6.1.2)
Cobaltochelatase CobT {ECO:0000313|EMBL:CCA93555.1}; EC=6.6.1.2 {ECO:0000313|EMBL:CCA93555.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Cobaltochelatase CobT n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IQ53_9SPHN rbh
scnpilot_p_inoc_scaffold_80_508
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

513599..514144
DNA (546bp) protein (182aa)
UPI0003D5A1E7 related cluster n=1 Tax=unknown RepID=UPI0003D5A1E7
Uncharacterized protein {ECO:0000313|EMBL:ETI63276.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_p_inoc_scaffold_80_509
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

514189..514707
DNA (519bp) protein (173aa)
Putative lipoprotein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9E3_9SPHN
UPI0003D60591 related cluster Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
putative lipoprotein
scnpilot_p_inoc_scaffold_80_510
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

514785..516254
DNA (1470bp) protein (490aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=SYC_NOVAD rbh
Displaying items 481-510 of 577 in total

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