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scnpilot_p_inoc_scaffold_80

Search features with annotation key words

Displaying items 511-540 of 577 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_80_511
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(516373..516798)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GGA0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL29010.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_80_512
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(516788..516976)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5R5_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26808.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_80_513
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

517089..517739
DNA (651bp) protein (217aa)
Putative transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2H155_9SPHN
Putative transcriptional regulator {ECO:0000313|EMBL:EJL29008.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
transcriptional regulator
scnpilot_p_inoc_scaffold_80_514
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(517759..518259)
DNA (501bp) protein (167aa)
thiol-disulfide isomerase n=1 Tax=Sphingomonas elodea RepID=UPI0002630FC9
Sphingomonas taxi strain 30a NODE_63, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27549.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
thiol-disulfide isomerase
scnpilot_p_inoc_scaffold_80_515
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

518354..519040
DNA (687bp) protein (229aa)
Glyoxalase II family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N921_ERYLH
Hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_p_inoc_scaffold_80_516
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(519069..519482)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C8M0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ80232.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_80_517
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

519866..520936
DNA (1071bp) protein (357aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EII5_9SPHN rbh
phosphate acyltransferase
scnpilot_p_inoc_scaffold_80_518
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

520933..521904
DNA (972bp) protein (324aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-ACP synthase (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EII6_9SPHN rbh
scnpilot_p_inoc_scaffold_80_519
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

522029..522322
DNA (294bp) protein (98aa)
transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6B942
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1630648 species="Bacteria; Proteobacte
ihfA; integration host factor subunit alpha
scnpilot_p_inoc_scaffold_80_520
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

522359..522709
DNA (351bp) protein (117aa)
Transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IQ40_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:KHK91634.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
transcriptional regulator
scnpilot_p_inoc_scaffold_80_521
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(522714..523274)
DNA (561bp) protein (187aa)
Phosphohistidine phosphatase SixA n=1 Tax=Novosphingobium sp. AP12 RepID=J2GG91_9SPHN
Phosphohistidine phosphatase {ECO:0000313|EMBL:KHK91633.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
phosphohistidine phosphatase
scnpilot_p_inoc_scaffold_80_522
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(523281..526070)
DNA (2790bp) protein (930aa)
Putative ATP-dependent helicase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIC4_9SPHN rbh
Putative ATP-dependent helicase {ECO:0000313|EMBL:GAD48080.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
helicase c2
scnpilot_p_inoc_scaffold_80_523
unknown

Not on your lists

comp(526133..526270)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_80_524
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

526415..528007
DNA (1593bp) protein (531aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1630648 species="Bacteria; Proteoba
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
lysyl-tRNA synthetase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4F45C rbh
scnpilot_p_inoc_scaffold_80_525
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(528246..528935)
DNA (690bp) protein (230aa)
2OG-Fe(II) oxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5T2_NOVAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
2OG-Fe(II) oxygenase
scnpilot_p_inoc_scaffold_80_526
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(529011..529982)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5T3_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26790.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_p_inoc_scaffold_80_527
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(530173..531846)
DNA (1674bp) protein (558aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z915_9SPHN
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGD58964.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
putative ABC-type transporter ATPase component
scnpilot_p_inoc_scaffold_80_528
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

531943..533286
DNA (1344bp) protein (448aa)
Peptidase M28 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5T6_NOVAD rbh
Aminopeptidase {ECO:0000313|EMBL:GAO55415.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp.
peptidase M28
scnpilot_p_inoc_scaffold_80_529
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(533287..534351)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A363_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49193.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_80_530
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

534510..535988
DNA (1479bp) protein (493aa)
Methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8C6_9SPHN
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:GAO53027.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
chemotaxis protein
scnpilot_p_inoc_scaffold_80_531
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

536115..537500
DNA (1386bp) protein (462aa)
Sugar transferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6N5_NOVAD rbh
Sugar transferase {ECO:0000313|EMBL:KHS49006.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sub
sugar transferase
scnpilot_p_inoc_scaffold_80_532
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

537502..539607
DNA (2106bp) protein (702aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IQT7_9SPHN
scnpilot_p_inoc_scaffold_80_533
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

539609..540970
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6N7_NOVAD rbh
Response regulatory protein {ECO:0000313|EMBL:GAO55945.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
two component sigma-54 specific Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_80_534
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(541192..542238)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6P0_NOVAD
Integral membrane protein TerC family protein {ECO:0000313|EMBL:KHS49001.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_80_535
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(542259..543131)
DNA (873bp) protein (291aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Novosphingobium sp. AP12 RepID=J3A1Z0_9SPHN rbh
scnpilot_p_inoc_scaffold_80_536
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

543322..544848
DNA (1527bp) protein (509aa)
amino acid permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6EBCC rbh
Amino acid transporter {ECO:0000313|EMBL:EGD58756.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
amino acid transporter
scnpilot_p_inoc_scaffold_80_537
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(544906..545595)
DNA (690bp) protein (230aa)
chemotaxis protein CheY n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B715A1 rbh
phosphate regulon response regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
two component transcriptional regulator
scnpilot_p_inoc_scaffold_80_538
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(545615..546295)
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G606_NOVAD
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
phosphate uptake regulator PhoU
scnpilot_p_inoc_scaffold_80_539
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(546416..547672)
DNA (1257bp) protein (419aa)
histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G611_NOVAD
scnpilot_p_inoc_scaffold_80_540
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

548146..553581
DNA (5436bp) protein (1812aa)
Putative autotransporter protein (Fragment) n=1 Tax=Novosphingobium sp. AP12 RepID=J2H7Y4_9SPHN
Putative autotransporter protein {ECO:0000313|EMBL:EJL31523.1}; Flags: Precursor; Fragment;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
outer membrane autotransporter barrel domain-containing protein
Displaying items 511-540 of 577 in total

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